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WELCOME TO KBASE

The knowledge creation and discovery environment for systems biology.

GET STARTED


DISCOVER MORE WITH A POWERFUL, OPEN SCIENCE DATA PLATFORM

Developed for bench biologists and bioinformaticians, The Department of Energy
Systems Biology Knowledgebase (KBase) is a software and data science platform
designed to meet the grand challenge of systems biology: predicting and
designing biological function.

TECHNOLOGY
Data Science Platform

Analyze private data in the context of public data with leading open-source
tools powered by high-performance computing.

Free and Easy to Use

Create a free account and begin exploring what KBase can do for your research.

COMMUNITY
Reproducible Science

Capture your discoveries in a Narrative, an interactive digital notebook that
can be shared with the world.

Collaborative Research

Manage data access and sharing across your project, laboratory, or institution.

STEWARDSHIP
Control Your Data

Keep data private until you’re ready to share with the public.

Data Tracking

Version-controlled apps and data provenance allow you to track your data.


WHY KBASE?

KBase is the first large-scale data science platform that enables users to
upload their own data, analyze it alongside collaborator and public data, build
increasingly realistic models, and share and publish reproducible workflows and
conclusions.

KBase integrates data and tools in a unified graphical interface. Users no
longer need to do analyses across multiple systems in order to create and run
sophisticated systems biology workflows. KBase allows users to perform
large-scale analyses and combine multiple lines of evidence to model plant and
microbial physiology and community dynamics.

READ MORE



GETTING STARTED WITH KBASE

CREATE AN ACCOUNT


READ ABOUT KBASE IN NATURE BIOTECHNOLOGY*

For a comprehensive overview of KBase and its scientific impact, this
publication details the unique features and infrastructure of the KBase platform
through several scientific use cases.

READ MORE
*How to cite: Arkin AP, Cottingham RW, Henry CS, et al. KBase: The United States
Department of Energy Systems Biology Knowledgebase. Nature Biotechnology.
2018;36: 566. doi: 10.1038/nbt.4163



LOOKING FOR INFORMATION ON TOOLS AND RESOURCES?

Check out KBase Documentation for our Getting Started guide and information on
tools in the App Catalog. KBase is a fully open source software project
available on GitHub.



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