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 * About Us People Facilities History and Values Partnerships Donors MUCOVID
 * Research Autoimmune Myositis Bioinformatics Biostatistics Drug
   Hypersensitivity Laboratory Science Multiple Sclerosis Research &
   Achievements Control cohort
 * Laboratory DNA Sequencing HLA Typing TCR sequencing Shipments of Sample
   Material Accreditation and Quality Standards Register or Login Other Assays
   and Services
 * Publications Researcher Publications Internal Documents Working with us
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 * News News Upcoming Events
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 * /
 * About Us/
    * People
    * Facilities
    * History and Values
    * Partnerships
    * Donors
    * MUCOVID

 * Research/
    * Autoimmune Myositis
    * Bioinformatics
    * Biostatistics
    * Drug Hypersensitivity
    * Laboratory Science
    * Multiple Sclerosis
    * Research & Achievements
    * Control cohort

 * Laboratory/
    * DNA Sequencing
    * HLA Typing
    * TCR sequencing
    * Shipments of Sample Material
    * Accreditation and Quality Standards
    * Register or Login
    * Other Assays and Services

 * Publications/
    * Researcher Publications
    * Internal Documents
    * Working with us

 * Students/
    * Opportunities
    * Student Information Day

 * News/
    * News
    * Upcoming Events

 * Contact/

The Institute for immunology and Infectious Diseases


VGAS :: IIID VGAS :: INSTALLING R & THE REQUIRED PACKAGES

 * /
 * About Us/
    * People
    * Facilities
    * History and Values
    * Partnerships
    * Donors
    * MUCOVID

 * Research/
    * Autoimmune Myositis
    * Bioinformatics
    * Biostatistics
    * Drug Hypersensitivity
    * Laboratory Science
    * Multiple Sclerosis
    * Research & Achievements
    * Control cohort

 * Laboratory/
    * DNA Sequencing
    * HLA Typing
    * TCR sequencing
    * Shipments of Sample Material
    * Accreditation and Quality Standards
    * Register or Login
    * Other Assays and Services

 * Publications/
    * Researcher Publications
    * Internal Documents
    * Working with us

 * Students/
    * Opportunities
    * Student Information Day

 * News/
    * News
    * Upcoming Events

 * Contact/

 


VGAS INSTRUCTIONS AND TUTORIALS


INSTALLING VGAS

VGAS currently runs under Microsoft Windows and requires the .NET framework
4.7.2 or newer to be installed. If an older version is detected then you will be
given an option to upgrade during the VGAS installation.
To install VGAS simply double-click on the setup.exe icon.


HARDWARE RECOMMENDATIONS

Minimum Requirements:

 * Processor - At least 3.0 Ghz Intel Core i5, i7 or AMD FX

 * Memory - 8 GB

 * System hard disk - SATA or SSD

 * Graphics Card - entry-level

Recommended:

 * Processor - Newer generation 3.5 Ghz Intel Core i7 or higher

 * Memory - 16 GB (32 GB+ maybe required for larger datasets, E.g. CITE-Seq
   data)

 * System hard disk - M.2 or NVMe SSD

 * Graphics Card - mid-level

VGAS is an interactive visualization-based application which runs best on dual
monitors at 1080p.


INSTALLING R & THE REQUIRED PACKAGES

 1. Installing R - VGAS is now compatible with R version 4.0.4 (download)

 2. Installing Bioconductor and Bioconductor packages using BiocManager

 3. Installing Non-Bioconductor packages

 4. Installing PRESTO Wilcoxon Rank Sum Test and it's dependencies

 5. Checking Bioconductor package versions are correct


 * /
 * About Us/
    * People
    * Facilities
    * History and Values
    * Partnerships
    * Donors
    * MUCOVID

 * Research/
    * Autoimmune Myositis
    * Bioinformatics
    * Biostatistics
    * Drug Hypersensitivity
    * Laboratory Science
    * Multiple Sclerosis
    * Research & Achievements
    * Control cohort

 * Laboratory/
    * DNA Sequencing
    * HLA Typing
    * TCR sequencing
    * Shipments of Sample Material
    * Accreditation and Quality Standards
    * Register or Login
    * Other Assays and Services

 * Publications/
    * Researcher Publications
    * Internal Documents
    * Working with us

 * Students/
    * Opportunities
    * Student Information Day

 * News/
    * News
    * Upcoming Events

 * Contact/


IIID

The Institute for Immunology and Infectious Diseases offers a range of
accredited clinical, laboratory and consultancy services. We are happy to talk
with you about the Institute’s research approach and strategy, project design
capacity and educational opportunities.

The work we do at IIID delivers on our strategic objectives:

To identify the most pressing clinical questions and develop hypotheses.

To conduct clinical observational and basic science research to address these
hypotheses

To translate the results into improvements in clinical care

To extend the benefits worldwide through cooperation with likeminded scientists
and clinicians.

 



 

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Murdoch University
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Murdoch WA 6150
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+61 8 9360 1352
 contact@iiid.com.au
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