gepia2.cancer-pku.cn Open in urlscan Pro
118.190.148.166  Public Scan

Form analysis
0 forms found in the DOM

Text Content

  GEPIA 2


 * Home


FUNCTIONS

 * Expression Analysis
   * General
   * Differential Genes
   * Expression DIY
   * Survival Analysis
   * Isoform Details
   * Correlation Analysis
   * Similar Genes Detection
   * Dimensionality Reduction
 * Custom Data Analysis
   * Cancer Subtype Classifier
   * Expression Comparison


EXTRAS

 * Docs
   * About
   * Help
   * API
   * Q & A
 * Examples
 * Dataset Sources
 * Deconvolution Analysis


×



TCGA Detail ACC Adrenocortical carcinoma BLCA Bladder Urothelial Carcinoma BRCA
Breast invasive carcinoma CESC Cervical squamous cell carcinoma and endocervical
adenocarcinoma CHOL Cholangio carcinoma COAD Colon adenocarcinoma DLBC Lymphoid
Neoplasm Diffuse Large B-cell Lymphoma ESCA Esophageal carcinoma GBM
Glioblastoma multiforme HNSC Head and Neck squamous cell carcinoma KICH Kidney
Chromophobe KIRC Kidney renal clear cell carcinoma KIRP Kidney renal papillary
cell carcinoma LAML Acute Myeloid Leukemia LGG Brain Lower Grade Glioma LIHC
Liver hepatocellular carcinoma LUAD Lung adenocarcinoma LUSC Lung squamous cell
carcinoma MESO Mesothelioma OV Ovarian serous cystadenocarcinoma PAAD Pancreatic
adenocarcinoma PCPG Pheochromocytoma and Paraganglioma PRAD Prostate
adenocarcinoma READ Rectum adenocarcinoma SARC Sarcoma SKCM Skin Cutaneous
Melanoma STAD Stomach adenocarcinoma TGCT Testicular Germ Cell Tumors THCA
Thyroid carcinoma THYM Thymoma UCEC Uterine Corpus Endometrial Carcinoma UCS
Uterine Carcinosarcoma UVM Uveal Melanoma

 * Single Gene Analysis
 * Cancer Type Analysis
 * Custom Data Analysis
 * Multiple Gene Analysis

ENTER GENE/ISOFORM NAME:

The indicators in search box are "symbol" or "alias (newest symbol)".

GoPIA!
Profile Boxplots Stage Plots Survival Analysis Similar

GIVEN A CANCER TYPE, GEPIA2 PROVIDES THESE ANALYSES:

DIFFERENTIAL GENES ANALYSIS

GEPIA2 allows users to apply custom statistical methods and thresholds on a
given dataset to dynamically obtain differentially expressed genes/isoforms and
their chromosomal distribution.

MOST SIGNIFICANT SURVIVAL GENES

Given a cancer type, the genes or isoforms most associated with patient survival
can be searched.

GIVEN A USER-UPLOAD RNA-SEQ DATA, GEPIA2 PROVIDES THESE ANALYSES:

CANCER SUBTYPE CLASSIFIER

The cancer subtype classifier takes an RNA-seq profile and makes a prediction.

EXPRESSION COMPARISON

For analyzing the user-upload data, GEPIA2 enables users compare their own data
with TCGA and GTEx data.

BASED ON MULTIPLE GENES, GEPIA2 PROVIDES THESE ANALYSES:

MULTIPLE GENE COMPARISON

This feature provides expression matrix plots based on a given gene list.

CORRELATION ANALYSIS

This function provides pair-wise gene/isoform/signature expression correlation
analysis for given sets of TCGA and/or GTEx expression data.

DIMENSIONALITY REDUCTION

Given a gene list, GEPIA2 performs Principal Component Analysis (PCA) using
custom TCGA and/or GTEx expression data.


 1. 
 2. 
 3. 
 4. 
 5. 
 6. 


Previous Next



GEPIA 2 - Copyright © 2018 Zhang's Lab.