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Name Size Type Genome Settings Status

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Type (set all):
Auto-detect

Auto-detectab1agilentbrukeryep.d.taragilentmasshunter.d.taragpampvis2arffasn1asn1-binaryaugustusaxtbambcfbcf_uncompressedbcsl.modelbcsl.tsbedbed12bed6bed_tabix.gzbedgraphbedstrictbgzipbigbedbigwigbilbiom1biom2blastxmlblibbref3brukerbaf.d.tarbrukertdf.d.tarbuscastepcelcellchira.sqlitechrintcifcismlckptcmapcmlconsensusxmlcoolcpscptcramcsfastacsvctctl.resultcuffdiff.sqlitecxbd3_hierarchydaadada2_dadadada2_errorratesdada2_mergepairsdada2_sequencetabledada2_uniquesdbndbnsfp.tabulardcddeeptools_compute_matrix_archivedeeptools_coverage_matrixden_fmtdlibdrfdtadta2ddziedredtaelandelandmultielibemblencodepeakexcel.xlsexpression.jsonextxyzfaifast5.tarfast5.tar.bz2fast5.tar.gzfastafasta.gzfastgfastqfastq.bz2fastq.gzfastqcssangerfastqcssanger.bz2fastqcssanger.gzfastqilluminafastqillumina.bz2fastqillumina.gzfastqsangerfastqsanger.bz2fastqsanger.gzfastqsolexafastqsolexa.bz2fastqsolexa.gzfcsfeaturexmlffdataffindexfitsflowclrflowframeflowmfiflowscoreflowsetflowstat1flowstat2flowstat3flowtextflvfpsfqtocfsomgafa.sqlitegalgatk_dbsnpgatk_intervalgatk_recalgatk_reportgatk_tranchegemini.sqlitegenbankgenbank.gzgenenotebookgeojsongfa1gfa1.gzgfa2gfa2.gzgffgff3gff3.bz2gff3.gzgff_tabix.gzgiigii.gzgmsh.geogmsh.mshgprgrdgrd.tgzgribgrogtfh5h5adh5mlmhdf4hdrhdthep.roothexrd.accepted_orientationshexrd.eta_ome.npzhexrd.images.npzhexrd.materials.h5hexrd.scored_orientations.npzhexrd.ymlhhrhlfhmm2hmm3icmidatidpdbidxmlimgt.jsoninchiinpinpcrdintermine_tabularintervalipynbitpjellyfishjp2jsonjsonldjuicer_medium_tabix.gzkallisto.idxkroeniklavlenloommafmascotxmlmaskinfo-asn1maskinfo-asn1-binarymcoolmdpmemepspmemexmlmeryldbmetacyto_clr.txtmetacyto_stats.txtmetacyto_summary.txtmgfmkvmolmol2mongodbmothur.accnosmothur.alignmothur.align.checkmothur.align.reportmothur.axesmothur.cons.taxonomymothur.count_tablemothur.designmothur.distmothur.filtermothur.filtered.masked.quanmothur.filtered.quanmothur.freqmothur.groupsmothur.listmothur.lower.distmothur.mapmothur.masked.quanmothur.namesmothur.oligosmothur.otumothur.otu.corrmothur.otulabelsmothur.pair.distmothur.quanmothur.rabundmothur.rdp.taxonomymothur.ref.taxonomymothur.relabundmothur.sabundmothur.seq.taxonomymothur.sff.flowmothur.sharedmothur.square.distmothur.summarymothur.tax.summarymothur.tremp3mp4mpgmrcmrmms2mshmspmtxmz.sqlitemz5mzdatamzidmzmlmzqmzqcmztabmztab2mzxmln3ncbi_genome_dataset.zipncbitaxonomy.sqlitendxneper.mscellneper.pointsneper.points.tsvneper.tesrneper.tessnetcdfnewicknexnhxnii1nii1.gznii2nii2.gznmrmlno_unzip.zipnpzntoboodgiome.tiffonnxoswowloxlicgoxligloxlingoxlissoxlistoxlitspafpaf.gzparparamparamxmlparquetpdbpdbqtpdfpeffpeplistpeptideshaker_archivepepxmlpepxml.tsvpharphylipphyloseqphyloxmlpicard_interval_listpileuppithya.modelpithya.propertypithya.resultplyasciiplybinarypngpostgresqlpovpqppqrpretextprjprmtopprobamprobedprotobuf2protobuf3protxmlprotxml.tsvpslpsmspssm-asn1ptkscmpqcmlqiime2.tabularqname_sorted.bamqual454qualilluminaqualsolexaqualsolidqzaqzvrdatardata.camera.negativerdata.camera.positiverdata.camera.quickrdata.msnbase.rawrdata.scerdata.xcms.fillpeaksrdata.xcms.findchrompeaksrdata.xcms.grouprdata.xcms.rawrdata.xcms.retcorrdfrdock_asrdsrma6rna_epssamsbmlscfscidxscoolsdfsearchgui_archivesf3sffsifsmatsmisnaphmmsnpeffdbsnpmatrixsnptestsource.csource.cppsource.cssource.gosource.hsource.pysource.rsspec.xmlsplib_noindexsqlitesqmasssrasra_manifest.tabularstarstlstockholmstorm.checkstorm.sampletabulartabular.gztandemtartaxonomytcktextgridtgzthermo.rawtifftomltoptprtrackhubtrafoxmltramltrktrrtsvttltwobittxtuniprotxmlunsorted.bamvcfvcf_bgzipvelvgvisium.tar.gzvtkasciivtkbinarywatersmasslynx.raw.tarwavwiff.tarwiff2.tarwigxgxgmmlxlsxxmfaxmlxquest.xmlxsdxtcxvgxyzyamlzipzset.geof
Genome (set all):
unspecified (?)

unspecified (?) A. ceylanicum Mar. 2014 (WS243/Acey_2013.11.30.genDNA/ancCey1)
(ancCey1) A. gambiae Feb. 2003 (IAGEC MOZ2/anoGam1) (anoGam1) A. gambiae Oct.
2006 (AgamP3/anoGam3) (anoGam3) A. mellifera 04 Nov 2010 (Amel_4.5/apiMel4)
(apiMel4) A. mellifera Jan. 2005 (Baylor 2.0/apiMel2) (apiMel2) A. mellifera
July 2004 (Baylor 1.2/apiMel1) (apiMel1) A. mellifera Nov. 2010
(GCF_000002195.4/Amel_4.5) (Amel_4.5) Aardvark May 2012 (OryAfe1.0/oryAfe1)
(oryAfe1) Acaryochloris marina MBIC11017 (12997) Acholeplasma laidlawii PG-8A
(19259) Acidiphilium cryptum JF-5 (acidCryp_JF_5) Acidobacteria bacterium
Ellin345 (acidBact_ELLIN345) Acidothermus cellulolyticus 11B (acidCell_11B)
Acidovorax avenae subsp. citrulli AAC00-1 (15708) Acidovorax sp. JS42 (acidJS42)
Acinetobacter baumannii (13001) Acinetobacter baumannii (28921) Acinetobacter
baumannii ATCC 17978 (17477) Acinetobacter baumannii Oct. 2012
(aciBauTYTH_1/aciBauTYTH_1) (aciBauTYTH_1) Acinetobacter sp. ADP1 (acinSp_ADP1)
Actinobacillus pleuropneumoniae L20 (actiPleu_L20) Actinobacillus
pleuropneumoniae serovar 3 str. JL03 (19135) Actinobacillus succinogenes 130Z
(13370) Aeromonas hydrophila subsp. hydrophila ATCC 7966 (aeroHydr_ATCC7966)
Aeromonas salmonicida subsp. salmonicida A449 (16723) Aeropyrum pernix K1
(aerPer1) African clawed frog Aug. 2016 (Xenopus_laevis_v2/xenLae2) (xenLae2)
Afrotheria Apr. 24. 2006 (UCSC Recon/afrOth13) (afrOth13) Agrobacterium
tumefaciens str. C58 (283) Alcanivorax borkumensis SK2 (alcaBork_SK2)
Alkalilimnicola ehrlichei MLHE-1 (alkaEhrl_MLHE_1) Alkaliphilus metalliredigens
QYMF (13006) Alkaliphilus oremlandii OhILAs (16083) Alpaca Jul. 2008
(Broad/vicPac1) (vicPac1) Alpaca Mar. 2013 (Vicugna_pacos-2.0.1/vicPac2)
(vicPac2) Amazon molly 28 Oct-2013 (Poecilia_formosa-5.1.2/poeFor1) (poeFor1)
American alligator Aug. 2012 (allMis0.2/allMis1) (allMis1) American alligator
November 2011 (UCSC aMiss_v0.1c27/allMis0) (allMis0) Amur tiger 06 Sep 2013
(PanTig1.0/panTig1) (panTig1) Anabaena variabilis ATCC 29413
(anabVari_ATCC29413) Anaeromyxobacter dehalogenans 2CP-C (anaeDeha_2CP_C)
Anaeromyxobacter sp. Fw109-5 (17729) Anaplasma marginale str. St. Maries
(anapMarg_ST_MARIES) Anaplasma phagocytophilum HZ (336) Angolan colobus Mar.
2015 (Cang.pa_1.0/colAng1) (colAng1) Aquifex aeolicus VF5 (aquiAeol) Arabidopsis
lyrata (Araly1) Arabidopsis thaliana TAIR10 (Arabidopsis_thaliana_TAIR10)
(Arabidopsis_thaliana_TAIR10) Arabidopsis thaliana TAIR7 (araTha1) Arabidopsis
thaliana TAIR8 (arabidopsis_tair8) Arabidopsis thaliana TAIR9 (arabidopsis)
Archaeoglobus fulgidus DSM 4304 (archFulg1) Arcobacter butzleri RM4018 (16319)
Armadillo Dec. 2011 (Baylor/dasNov3) (dasNov3) Armadillo Jul. 2008
(Broad/dasNov2) (dasNov2) Armadillo May 2005 (Broad/dasNov1) (dasNov1)
Arthrobacter aurescens TC1 (12512) Arthrobacter sp. FB24 (arthFB24) Aster
yellows witches'-broom phytoplasma AYWB (13478) Atlantic cod May 2010 (Genofisk
GadMor_May2010/gadMor1) (gadMor1) Axolotl Dec. 2018 (ASM291563v2/ambMex2)
(ambMex2) Axolotl Feb. 2018 (ASM291563v1/ambMex1) (ambMex1) Azoarcus sp. BH72
(13217) Azoarcus sp. EbN1 (azoaSp_EBN1) Azorhizobium caulinodans ORS 571
(azorCaul2) Baboon Apr. 2017 (Panu_3.0/papAnu4) (papAnu4) Baboon Feb. 2013
(Baylor Panu_2.0/papAnu3) (papAnu3) Baboon Mar. 2012 (Baylor Panu_2.0/papAnu2)
(papAnu2) Baboon Nov. 2008 (Baylor Pham_1.0/papHam1) (papHam1) Bacillus
amyloliquefaciens FZB42 (13403) Bacillus anthracis str. 'Ames Ancestor' (10784)
Bacillus anthracis str. Ames (baciAnth_AMES) Bacillus anthracis str. Sterne
(10878) Bacillus cereus ATCC 10987 (74) Bacillus cereus ATCC 14579 (384)
Bacillus cereus E33L (12468) Bacillus cereus subsp. cytotoxis NVH 391-98 (13624)
Bacillus clausii KSM-K16 (13291) Bacillus halodurans C-125 (baciHalo) Bacillus
licheniformis ATCC 14580 (12388) Bacillus licheniformis ATCC 14580 (13082)
Bacillus pumilus SAFR-032 (20391) Bacillus subtilis subsp. subtilis str. 168
(baciSubt) Bacillus thuringiensis serovar konkukian str. 97-27 (10877) Bacillus
thuringiensis str. Al Hakam (18255) Bacillus weihenstephanensis KBAB4 (13623)
Bacteroides fragilis NCTC 9343 (46) Bacteroides fragilis YCH46 (13067)
Bacteroides thetaiotaomicron VPI-5482 (bactThet_VPI_5482) Bacteroides vulgatus
ATCC 8482 (13378) Bactrian camel Dec 2011 (CB1/camFer1) (camFer1) Barber pole
worm Dec. 2009 (WormBase WS210/haeCon1) (haeCon1) Barber pole worm Jul. 2013
(WormBase WS239/haeCon2) (haeCon2) Bartonella bacilliformis KC583 (16249)
Bartonella henselae str. Houston-1 (bartHens_HOUSTON_1) Bartonella quintana str.
Toulouse (44) Bartonella tribocorum CIP 105476 (28109) Baumannia cicadellinicola
str. Hc (Homalodisca coagulata) (baumCica_HOMALODISCA) Bdellovibrio
bacteriovorus HD100 (bdelBact) Beaver Feb. 2017 (C.can genome v1.0/casCan1)
(casCan1) Bicolor damselfish May 2014 (Stegastes_partitus-1.0.2/stePar1)
(stePar1) Bifidobacterium adolescentis ATCC 15703 (16321) Bifidobacterium longum
NCC2705 (bifiLong) Big brown bat Jul 2012 (EptFus1.0/eptFus1) (eptFus1) Bison
Oct. 2014 (Bison_UMD1.0/bisBis1) (bisBis1) Black flying-fox Aug 2012
(ASM32557v1/pteAle1) (pteAle1) Black lemur Aug. 2015
(Emacaco_refEf_BWA_oneround/eulMac1) (eulMac1) Black rockcod Jul 2014
(NC01/notCor1) (notCor1) Black snub-nosed monkey Aug. 2016 (ASM169854v1/rhiBie1)
(rhiBie1) Bonobo Aug. 2015 (MPI-EVA panpan1.1/panPan2) (panPan2) Bonobo May 2012
(Max-Planck/panPan1) (panPan1) Bordetella bronchiseptica RB50 (bordBron)
Bordetella parapertussis 12822 (25) Bordetella pertussis Tohama I (26)
Bordetella petrii DSM 12804 (28135) Boreoeutherian Apr. 24. 2006 (UCSC
Recon/borEut13) (borEut13) Boreoeutherian Nov. 19. 2005 (UCSC Recon/canHg12)
(canHg12) Borrelia afzelii PKo (17057) Borrelia burgdorferi B31 (borrBurg)
Borrelia garinii PBi (12554) Bradyrhizobium japonicum USDA 110 (bradJapo)
Bradyrhizobium sp. BTAi1 (16137) Bradyrhizobium sp. ORS278 (19575) Brandt's
myotis (bat) 28 Jun 2013 (ASM41265v1/myoBra1) (myoBra1) Brazilian guinea pig
Jan. 2014 (CavAp1.0/cavApe1) (cavApe1) Brown kiwi Jun. 2015 (MPI-EVA
AptMant0/aptMan1) (aptMan1) Brucella abortus biovar 1 str. 9-941 (9619) Brucella
canis ATCC 23365 (20243) Brucella melitensis 16M (brucMeli) Brucella melitensis
biovar Abortus 2308 (16203) Brucella ovis ATCC 25840 (12514) Brucella suis 1330
(320) Brucella suis ATCC 23445 (20371) Brush-tailed rat Apr 2012
(OctDeg1.0/octDeg1) (octDeg1) Buchnera aphidicola str. APS (Acyrthosiphon pisum)
(buchSp) Buchnera aphidicola str. Bp (Baizongia pistaciae) (256) Buchnera
aphidicola str. Cc (Cinara cedri) (16372) Buchnera aphidicola str. Sg
(Schizaphis graminum) (312) Budgerigar Sep. 2011 (WUSTL v6.3/melUnd1) (melUnd1)
Bundibugyo ebolavirus Aug. 2014 (NC_014373.1/bunEbo1) (bunEbo1) Burkholderia
ambifaria AMMD (burkCepa_AMMD) Burkholderia cenocepacia AU 1054
(burkCeno_AU_1054) Burkholderia cenocepacia HI2424 (burkCeno_HI2424)
Burkholderia cenocepacia MC0-3 (17929) Burkholderia mallei ATCC 23344
(burkMall_ATCC23344) Burkholderia mallei NCTC 10229 (13943) Burkholderia mallei
NCTC 10247 (13946) Burkholderia mallei SAVP1 (13947) Burkholderia multivorans
ATCC 17616 (17407) Burkholderia pseudomallei 1106a (burkPseu_1106A) Burkholderia
pseudomallei 1710b (13954) Burkholderia pseudomallei 668 (13953) Burkholderia
pseudomallei K96243 (178) Burkholderia sp. 383 (burk383) Burkholderia
thailandensis E264 (burkThai_E264) Burkholderia vietnamiensis G4 (burkViet_G4)
Burkholderia xenovorans LB400 (burkXeno_LB400) Burton's mouthbreeder Oct 2011
(AstBur1.0/hapBur1) (hapBur1) Bushbaby Dec. 2006 (Broad/otoGar1) (otoGar1)
Bushbaby Mar. 2011 (Broad/otoGar3) (otoGar3) C. angaria Apr. 2012
(WS232/ps1010rel8/caeAng2) (caeAng2) C. angaria Oct. 2010 (WS225/caeAng1)
(caeAng1) C. brenneri Feb. 2008 (WUGSC 6.0.1/caePb2) (caePb2) C. brenneri Jan.
2007 (WUGSC 4.0/caePb1) (caePb1) C. brenneri Nov. 2010 (C. brenneri
6.0.1b/caePb3) (caePb3) C. briggsae Apr. 2011 (WS225/cb4) (cb4) C. briggsae Aug
2005 (WUGSC prelim/cb2) (cb2) C. briggsae Jan. 2007 (WUGSC 1.0/cb3) (cb3) C.
briggsae July 2002 (WormBase cb25.agp8/cb1) (cb1) C. elegans Aug. 2007
(WS180/ce5) (ce5) C. elegans Feb 2009 (WS200/ce7) (ce7) C. elegans Feb. 2013
(WBcel235/ce11) (ce11) C. elegans Jan 2010 (WS210/ce9) (ce9) C. elegans Jan.
2007 (WS170/ce4) (ce4) C. elegans Jun 2009 (WS204/ce8) (ce8) C. elegans Mar.
2004 (WS120/ce2) (ce2) C. elegans March 2005 (WS140/ce3) (ce3) C. elegans May
2008 (WS190/ce6) (ce6) C. elegans Oct. 2010 (WS220/ce10) (ce10) C. intestinalis
Apr. 2011 (Kyoto KH/ci3) (ci3) C. intestinalis Dec. 2002 (JGI 1.0/ci1) (ci1) C.
intestinalis Mar. 2005 (JGI 2.1/ci2) (ci2) C. japonica Sep. 2010 (WUGSC
7.0.1/caeJap3) (caeJap3) C. japonica Aug. 2010 (WUSTL 7.0.1/caeJap4) (caeJap4)
C. japonica Jan. 2009 (WUGSC 4.0.1/caeJap2) (caeJap2) C. japonica Mar. 2008
(WUGSC 3.0.2/caeJap1) (caeJap1) C. remanei Jul. 2007 (WS220/caeRem4) (caeRem4)
C. remanei Mar. 2006 (WUGSC 1.0/caeRem2) (caeRem2) C. remanei March 2005 (WUGSC
prelim/caeRem1) (caeRem1) C. remanei May 2007 (WUGSC 15.0.1/caeRem3) (caeRem3)
C. savignyi Apr. 2003 (Broad/cioSav1) (cioSav1) C. savignyi July 2005 (Sidow Lab
2.0/cioSav2) (cioSav2) C. sp. 5 ju800 Jan. 2012
(WS230/Caenorhabditis_sp_5-JU800-1.0/caeSp51) (caeSp51) C. sp. 7 ju1286 Nov.
2010 (WUSTL 4.0.1/caeSp71) (caeSp71) C. sp. 9 ju1422 Nov. 2010 (WUSTL
3.0.1/caeSp91) (caeSp91) C. tropicalis Nov. 2010 (WS226/WUSTL 3.0.1/caeSp111)
(caeSp111) Cactus Nov. 2010 (CactusV3/cacTus3) (cacTus3) Cactus Oct. 2010
(Ngan10.1/cacTus2) (cacTus2) Cactus Sep. 2010 (CactusV1/cacTus1) (cacTus1)
Caldicellulosiruptor saccharolyticus DSM 8903 (caldSacc_DSM8903) Caldivirga
maquilingensis IC-167 (caldMaqu1) Campylobacter concisus 13826 (17159)
Campylobacter curvus 525.92 (17161) Campylobacter fetus subsp. fetus 82-40
(campFetu_82_40) Campylobacter hominis ATCC BAA-381 (20083) Campylobacter jejuni
RM1221 (campJeju_RM1221) Campylobacter jejuni subsp. doylei 269.97 (17163)
Campylobacter jejuni subsp. jejuni 81-176 (campJeju_81_176) Campylobacter jejuni
subsp. jejuni 81116 (17953) Campylobacter jejuni subsp. jejuni NCTC 11168
(campJeju) Candidatus Blochmannia floridanus (blocFlor) Candidatus Blochmannia
pennsylvanicus str. BPEN (13875) Candidatus Carsonella ruddii PV
(candCars_RUDDII) Candidatus Desulforudis audaxviator MP104C (21047) Candidatus
Korarchaeum cryptofilum OPF8 (16525) Candidatus Methanoregula boonei 6A8
(methBoon1) Candidatus Pelagibacter ubique HTCC1062 (candPela_UBIQUE_HTCC1)
Candidatus Protochlamydia amoebophila UWE25 (paraSp_UWE25) Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica) (16841) Candidatus Sulcia muelleri
GWSS (19617) Candidatus Vesicomyosocius okutanii HA (18267) Cape elephant shrew
Aug 2012 (EleEdw1.0/eleEdw1) (eleEdw1) Cape golden mole Aug 2012
(ChrAsi1.0/chrAsi1) (chrAsi1) Carboxydothermus hydrogenoformans Z-2901
(carbHydr_Z_2901) Cat Dec. 2008 (NHGRI/GTB V17e/felCat4) (felCat4) Cat Mar. 2006
(Broad/felCat3) (felCat3) Cat Nov. 2014 (ICGSC Felis_catus_8.0/felCat8)
(felCat8) Cat Nov. 2017 (Felis_catus_9.0/felCat9) (felCat9) Cat Sep. 2011 (ICGSC
Felis_catus 6.2/felCat5) (felCat5) Catarrhini June 13. 2006 (UCSC Recon/catArr1)
(catArr1) Caulobacter crescentus CB15 (caulCres) Caulobacter sp. K31 (16306)
CentromereY 2013 GrCh38 (centromeres1) Chicken Dec 2015
(Gallus_gallus-5.0/galGal5) (galGal5) Chicken Feb. 2004 (WUGSC 1.0/galGal2)
(galGal2) Chicken Mar. 2018 (GRCg6a/galGal6) (galGal6) Chicken May 2006 (WUGSC
2.1/galGal3) (galGal3) Chicken Nov. 2011 (ICGSC Gallus_gallus-4.0/galGal4)
(galGal4) Chimp Feb. 2011 (CSAC 2.1.4/panTro4) (panTro4) Chimp Jan. 2018
(Clint_PTRv2/panTro6) (panTro6) Chimp Mar. 2006 (CGSC 2.1/panTro2) (panTro2)
Chimp May 2016 (Pan_tro 3.0/panTro5) (panTro5) Chimp Nov. 2003 (CGSC
1.1/panTro1) (panTro1) Chimp Oct. 2010 (CGSC 2.1.3/panTro3) (panTro3) Chinchilla
May 2012 (ChiLan1.0/chiLan1) (chiLan1) Chinese hamster Aug. 2011 (CHO K1 cell
line/criGriChoV1) (criGriChoV1) Chinese hamster Jul. 2013
(C_griseus_v1.0/criGri1) (criGri1) Chinese hamster Jun. 2017
(CHOK1S_HZDv1/criGriChoV2) (criGriChoV2) Chinese pangolin Aug 2014
(M_pentadactyla-1.1.1/manPen1) (manPen1) Chinese softshell turtle Oct 2011
(PelSin_1.0/pelSin1) (pelSin1) Chinese tree shrew Jan 2013 (TupChi_1.0/tupChi1)
(tupChi1) Chlamydia muridarum Nigg (229) Chlamydia trachomatis 434/Bu (28583)
Chlamydia trachomatis A/HAR-13 (13885) Chlamydia trachomatis D/UW-3/CX
(chlaTrac) Chlamydia trachomatis L2b/UCH-1/proctitis (28585) Chlamydophila
abortus S26/3 (355) Chlamydophila caviae GPIC (228) Chlamydophila felis Fe/C-56
(370) Chlamydophila pneumoniae AR39 (247) Chlamydophila pneumoniae CWL029
(chlaPneu_CWL029) Chlamydophila pneumoniae J138 (257) Chlamydophila pneumoniae
TW-183 (420) Chlorobium chlorochromatii CaD3 (chloChlo_CAD3) Chlorobium
phaeobacteroides DSM 266 (12609) Chlorobium tepidum TLS (chloTepi_TLS)
Chloroflexus aurantiacus J-10-fl (59) Chromobacterium violaceum ATCC 12472
(chroViol) Chromohalobacter salexigens DSM 3043 (chroSale_DSM3043) Citrobacter
koseri ATCC BAA-895 (12716) Clavibacter michiganensis subsp. michiganensis NCPPB
382 (clavMich_NCPPB_382) Clavibacter michiganensis subsp. sepedonicus (184)
Clostridium acetobutylicum ATCC 824 (77) Clostridium beijerinckii NCIMB 8052
(12637) Clostridium botulinum A str. ATCC 19397 (19517) Clostridium botulinum A
str. ATCC 3502 (193) Clostridium botulinum A str. Hall (19521) Clostridium
botulinum A3 str. Loch Maree (28507) Clostridium botulinum B1 str. Okra (28505)
Clostridium botulinum F str. Langeland (19519) Clostridium difficile 630 (78)
Clostridium kluyveri DSM 555 (19065) Clostridium novyi NT (16820) Clostridium
perfringens ATCC 13124 (304) Clostridium perfringens SM101 (12521) Clostridium
perfringens str. 13 (79) Clostridium phytofermentans ISDg (16184) Clostridium
tetani E88 (81) Clostridium thermocellum ATCC 27405 (314) Coelacanth Aug. 2011
(Broad/latCha1) (latCha1) Collared flycatcher Jun 2013 (FicAlb1.5/ficAlb2)
(ficAlb2) Collared flycatcher Jun. 2013 (FicAlb1.5/ficAlb1) (ficAlb1) Colwellia
psychrerythraea 34H (colwPsyc_34H) Coquerel's sifaka Mar. 2015
(Pcoq_1.0/proCoq1) (proCoq1) Corynebacterium diphtheriae NCTC 13129 (87)
Corynebacterium efficiens YS-314 (coryEffi_YS_314) Corynebacterium glutamicum
ATCC 13032 (13760) Corynebacterium glutamicum ATCC 13032 (307) Corynebacterium
glutamicum R (19193) Corynebacterium jeikeium K411 (13967) Cow Apr. 2009 (Baylor
Btau_4.2/bosTau5) (bosTau5) Cow Apr. 2018 (ARS-UCD1.2/bosTau9) (bosTau9) Cow
Aug. 2006 (Baylor 3.1/bosTau3) (bosTau3) Cow Aug. 2009 (UMD3.1) (bosTauMd3) Cow
Jun. 2014 (Bos_taurus_UMD_3.1.1/bosTau8) (bosTau8) Cow Mar. 2005 (Baylor
2.0/bosTau2) (bosTau2) Cow Nov. 2009 (Bos_taurus_UMD_3.1/bosTau6) (bosTau6) Cow
Oct. 2007 (Baylor 4.0/bosTau4) (bosTau4) Cow Oct. 2011 (Baylor
Btau_4.6.1/bosTau7) (bosTau7) Coxiella burnetii Dugway 5J108-111 (16721)
Coxiella burnetii RSA 331 (16791) Coxiella burnetii RSA 493 (coxiBurn)
Crab-eating macaque Jun. 2013 (Macaca_fascicularis_5.0/macFas5) (macFas5)
Cytophaga hutchinsonii ATCC 33406 (cytoHutc_ATCC33406) D. albomicans 21 May 2012
(DroAlb_1.0/droAlb1) (droAlb1) D. ananassae Aug. 2005 (Agencourt prelim/droAna2)
(droAna2) D. ananassae Feb. 2006 (droAna3) D. ananassae July 2004 (TIGR/droAna1)
(droAna1) D. biarmipes 04 Mar 2013 (Dbia_2.0/droBia2) (droBia2) D. bipectinata
04 Mar 2013 (Dbip_2.0/droBip2) (droBip2) D. elegans 04 Mar 2013
(Dele_2.0/droEle2) (droEle2) D. erecta Aug. 2005 (Agencourt prelim/droEre1)
(droEre1) D. erecta Feb. 2006 (droEre2) D. eugracilis 04 Mar 2013
(Deug_2.0/droEug2) (droEug2) D. ficusphila 04 Mar 2013 (Dfic_2.0/droFic2)
(droFic2) D. grimshawi Aug. 2005 (Agencourt prelim/droGri1) (droGri1) D.
grimshawi Feb. 2006 (droGri2) D. kikkawai 04 Mar 2013 (Dkik_2.0/droKik2)
(droKik2) D. melanogaster Apr. 2004 (BDGP R4/dm2) (dm2) D. melanogaster Apr.
2006 (BDGP R5/dm3) (dm3) D. melanogaster Aug. 2014 (BDGP Release 6 + ISO1
MT/dm6) (dm6) D. melanogaster Jan. 2003 (BDGP R3/dm1) (dm1) D. miranda 19 Apr
2013 (DroMir_2.2/droMir2) (droMir2) D. mojavensis Aug. 2004 (Agencourt
prelim/droMoj1) (droMoj1) D. mojavensis Aug. 2005 (Agencourt prelim/droMoj2)
(droMoj2) D. mojavensis Feb. 2006 (droMoj3) D. persimilis Oct. 2005
(Broad/droPer1) (droPer1) D. pseudoobscura (dp4) (dp4) D. pseudoobscura 11 Apr
2013 (Dpse_3.0/droPse3) (droPse3) D. pseudoobscura Aug. 2003 (Baylor
freeze1/dp2) (dp2) D. pseudoobscura Nov. 2004 (FlyBase 1.03/dp3) (dp3) D.
rhopaloa 22 Feb 2013 (Drho_2.0/droRho2) (droRho2) D. sechellia Oct. 2005
(Broad/droSec1) (droSec1) D. simulans Apr. 2005 (WUGSC mosaic 1.0/droSim1)
(droSim1) D. simulans Sep. 2014 (ASM75419v2/droSim2) (droSim2) D. suzukii 30 Sep
2013 (Dsuzukii.v01/droSuz1) (droSuz1) D. takahashii 04 Mar 2013
(Dtak_2.0/droTak2) (droTak2) D. virilis Aug. 2005 (Agencourt prelim/droVir2)
(droVir2) D. virilis Feb. 2006 (Agencourt CAF1/droVir3) (droVir3) D. virilis
July 2004 (Agencourt prelim/droVir1) (droVir1) D. willistoni 03 Aug 2006
(dwil_caf1/droWil2) (droWil2) D. willistoni Feb. 2006 (droWil1) D. yakuba 27 Jun
2006 (dyak_caf1/droYak3) (droYak3) D. yakuba Apr. 2004 (WUGSC 1.0/droYak1)
(droYak1) D. yakuba Nov. 2005 (WUGSC 7.1/droYak2) (droYak2) Damara mole rat Sep.
2014 (DMR_v1.0/fukDam1) (fukDam1) David's myotis (bat) Aug 2012
(ASM32734v1/myoDav1) (myoDav1) Dechloromonas aromatica RCB (dechArom_RCB) Deer
Tick (Ixodes scapularis) (IscaW1) Dehalococcoides ethenogenes 195 (dehaEthe_195)
Dehalococcoides sp. BAV1 (15770) Dehalococcoides sp. CBDB1 (15604) Deinococcus
geothermalis DSM 11300 (deinGeot_DSM11300) Deinococcus radiodurans R1 (deinRadi)
Delftia acidovorans SPH-1 (17413) Desulfitobacterium hafniense Y51
(desuHafn_Y51) Desulfococcus oleovorans Hxd3 (18007) Desulfotalea psychrophila
LSv54 (desuPsyc_LSV54) Desulfotomaculum reducens MI-1 (desuRedu_MI_1)
Desulfovibrio desulfuricans G20 (329) Desulfovibrio vulgaris subsp. vulgaris DP4
(17227) Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
(desuVulg_HILDENBOROUG) Dichelobacter nodosus VCS1703A (dichNodo_VCS1703A)
Dinoroseobacter shibae DFL 12 (17417) Dog July 2004 (Broad/canFam1) (canFam1)
Dog May 2003 (TIGR Poodle/canFamPoodle1) (canFamPoodle1) Dog May 2005
(Broad/canFam2) (canFam2) Dog Sep. 2011 (Broad CanFam3.1/canFam3) (canFam3) Dog
heartworm Sep. 2013 (WS240/D. immitis v2.2/dirImm1) (dirImm1) Dolphin Feb. 2008
(Broad/turTru1) (turTru1) Dolphin Oct. 2011 (Baylor Ttru_1.4/turTru2) (turTru2)
Domestic goat May 2012 (CHIR_1.0/capHir1) (capHir1) Drill Mar. 2015
(Mleu.le_1.0/manLeu1) (manLeu1) Eastern happy Jan. 2018 (fAstCal1.1/astCal1)
(astCal1) Ebola virus 49 sequences: 5 Ebola, 2 Marburg strains (eboVir2) Ebola
virus Aug. 2014 (46 strains eboVir1/eboVir1) (eboVir1) Ebola virus Sierra Leone
2014 (G3683/KM034562.1/eboVir3) (eboVir3) Ecoref Feb. 2013 (ecoRef3/ecoRef3)
(ecoRef3) Ecoref Feb. 2013 (ecoRef4/ecoRef4) (ecoRef4) Ecoref Jan. 2013
(ecoRef1/ecoRef1) (ecoRef1) Ecoref Jan. 2013 (ecoRef2/ecoRef2) (ecoRef2)
Egyptian rousette Mar 2016 (Raegyp2.0/rouAeg1) (rouAeg1) Ehrlichia canis str.
Jake (10694) Ehrlichia chaffeensis str. Arkansas (325) Ehrlichia ruminantium
str. Gardel (13356) Ehrlichia ruminantium str. Welgevonden (13355) Ehrlichia
ruminantium str. Welgevonden (ehrlRumi_WELGEVONDEN) Elephant Jul. 2008
(Broad/loxAfr2) (loxAfr2) Elephant Jul. 2009 (Broad/loxAfr3) (loxAfr3) Elephant
May 2005 (Broad/loxAfr1) (loxAfr1) Elephant shark Dec. 2013
(Callorhinchus_milii-6.1.3/calMil1) (calMil1) Enterobacter sakazakii ATCC
BAA-894 (12720) Enterobacter sp. 638 (ente638) Enterococcus faecalis V583
(enteFaec_V583) Erythrobacter litoralis HTCC2594 (erytLito_HTCC2594) Escherichia
coli 536 (16235) Escherichia coli APEC O1 (eschColi_APEC_O1) Escherichia coli C
str. ATCC 8739 (18083) Escherichia coli CFT073 (eschColi_CFT073) Escherichia
coli DH10B (20079) Escherichia coli E24377A (13960) Escherichia coli EC4115
(eschColi_EC4115) Escherichia coli HS (13959) Escherichia coli K12
(eschColi_K12) Escherichia coli O157:H7 EDL933 (259) Escherichia coli O157:H7
str. Sakai (eschColi_O157H7) Escherichia coli SECEC SMS-3-5 (19469) Escherichia
coli TW14359 (eschColi_TW14359) Escherichia coli UTI89 (16259) Escherichia coli
W3110 (16351) Euarchontoglires Apr. 24. 2006 (UCSC Recon/euaGli13) (euaGli13)
European sea bass Apr 2014 (seabass_V1.0/dicLab1) (dicLab1) Eutheria Apr. 24.
2006 (UCSC Recon/eutHer13) (eutHer13) Evosim Feb. 2013 (evoSim1/evoSim1)
(evoSim1) Eye worm Jul. 2012 (WS235/L_loa_Cameroon_isolate/loaLoa1) (loaLoa1)
Ferret Apr. 2011 (MusPutFur1.0/musFur1) (musFur1) Fervidobacterium nodosum
Rt17-B1 (16719) Filarial worm May. 2014 (WS244/B_malayi-3.1/bruMal2) (bruMal2)
Filarial worm Sep. 2007 (TIGR 1.0/bruMal1) (bruMal1) Finegoldia magna ATCC 29328
(18981) Fission Yeast (S. pombe) (Schizosaccharomyces_pombe_1.1) Flag rockfish
22 Oct-2013 (SRub1.0/sebRub1) (sebRub1) Flavobacterium johnsoniae UW101
(flavJohn_UW101) Flavobacterium psychrophilum JIP02/86 (19979) Francisella
philomiragia subsp. philomiragia ATCC 25017 (27853) Francisella tularensis
subsp. holarctica (16421) Francisella tularensis subsp. holarctica FTA (20197)
Francisella tularensis subsp. holarctica OSU18 (17265) Francisella tularensis
subsp. novicida U112 (16088) Francisella tularensis subsp. tularensis FSC198
(17375) Francisella tularensis subsp. tularensis SCHU S4 (franTula_TULARENSIS)
Francisella tularensis subsp. tularensis WY96-3418 (18459) Frankia alni ACN14a
(17403) Frankia sp. CcI3 (franCcI3) Frankia sp. EAN1pec (13915) Fugu Aug. 2002
(JGI 3.0/fr1) (fr1) Fugu Oct. 2004 (JGI 4.0/fr2) (fr2) Fugu Oct. 2011
(FUGU5/fr3) (fr3) Fusobacterium nucleatum subsp. nucleatum ATCC 25586 (fusoNucl)
GRCh37.p10 Sep. 2012 (GRCh37.p10/hg19Patch10) (hg19Patch10) GRCh37.p13 Jun. 2013
(hg19Patch13) GRCh37.p2 Aug. 2009 (GRCh37.p2/hg19Patch2) (hg19Patch2) GRCh37.p5
Jun. 2011 (GRCh37.p5/hg19Patch5) (hg19Patch5) GRCh37.p9 Jul. 2012
(GRCh37.p9/hg19Patch9) (hg19Patch9) GRCh38.p11 Jun. 2017 (hg38Patch11) GRCh38.p2
Dec. 2014 (hg38Patch2) GRCh38.p3 Apr. 2015 (hg38Patch3) GRCh38.p5 Sep. 2015
(hg38Patch5) GRCh38.p6 Dec. 2015 (hg38Patch6) GRCh38.p7 Mar. 2016 (hg38Patch7)
GRCh38.p9 Sep. 2016 (hg38Patch9) GRCm38.p1 Aug. 2012 (GRCm38.p1/mm10Patch1)
(mm10Patch1) GRCm38.p4 Mar. 2015 (mm10Patch4) Garter snake Jun. 2015
(Thamnophis_sirtalis-6.0/thaSir1) (thaSir1) Geobacillus kaustophilus HTA426
(geobKaus_HTA426) Geobacillus thermodenitrificans NG80-2 (geobTher_NG80_2)
Geobacter metallireducens GS-15 (geobMeta_GS15) Geobacter sulfurreducens PCA
(geobSulf) Geobacter uraniireducens Rf4 (geobUran_RF4) Gharial APR 2009
(preliminary/gavGan0) (gavGan0) Gibbon Jan. 2010 (GGSC Nleu1.0/nomLeu1)
(nomLeu1) Gibbon Jun. 2011 (GGSC Nleu1.1/nomLeu2) (nomLeu2) Gibbon Oct. 2012
(GGSC Nleu3.0/nomLeu3) (nomLeu3) Glires Apr. 24. 2006 (UCSC Recon/gliRes13)
(gliRes13) Gloeobacter violaceus PCC 7421 (gloeViol) Gluconacetobacter
diazotrophicus PAl 5 (377) Gluconobacter oxydans 621H (glucOxyd_621H) Golden
eagle May 2014 (AquilaChrysaetos1/aquChr1) (aquChr1) Golden eagle Oct. 2014
(aquChr-1.0.2/aquChr2) (aquChr2) Golden hamster Mar 2013 (MesAur1.0/mesAur1)
(mesAur1) Golden snub-nosed monkey Oct. 2014 (Rrox_v1/rhiRox1) (rhiRox1)
Golden-collared manakin May 2014 (ASM69201v1/manVit1) (manVit1) Gorilla Aug.
2009 (Sanger 4/gorGor2) (gorGor2) Gorilla Dec 2014 (gorGor4.1/gorGor4) (gorGor4)
Gorilla Mar. 2016 (GSMRT3/gorGor5) (gorGor5) Gorilla May 2011
(gorGor3.1/gorGor3) (gorGor3) Gorilla Oct. 2008 (Sanger 0.1/gorGor1) (gorGor1)
Gramella forsetii KT0803 (gramFors_KT0803) Granulibacter bethesdensis CGDNIH1
(granBeth_CGDNIH1) Greater horseshoe bat Sep. 2013 (ASM46549v1/rhiFer1)
(rhiFer1) Green monkey Jun 2013 (Chlorocebus_sabeus 1.0/chlSab1) (chlSab1) Green
monkey Mar. 2014 (Chlorocebus_sabeus 1.1/chlSab2) (chlSab2) Green seaturtle Mar
2013 (CheMyd_1.0/cheMyd1) (cheMyd1) Guinea pig Feb. 2008 (Broad/cavPor3)
(cavPor3) Guppy Apr. 2014 (Guppy_female_1.0/poeRet1) (poeRet1) H.
bacteriophora/m31e Aug. 2011 (WS229/H. bacteriophora 7.0/hetBac1) (hetBac1)
Haemophilus ducreyi 35000HP (38) Haemophilus influenzae 86-028NP (11752)
Haemophilus influenzae PittEE (16400) Haemophilus influenzae PittGG (16401)
Haemophilus influenzae Rd KW20 (haemInfl_KW20) Haemophilus somnus 129PT
(haemSomn_129PT) Haemophilus somnus 2336 (388) Hahella chejuensis KCTC 2396
(haheChej_KCTC_2396) Haloarcula marismortui ATCC 43049 (halMar1) Halobacterium
salinarum R1 (106) Halobacterium sp. NRC-1 (haloHalo1) Haloquadratum walsbyi DSM
16790 (haloWals1) Halorhodospira halophila SL1 (haloHalo_SL1) Hawaiian monk seal
Jun. 2017 (ASM220157v1/neoSch1) (neoSch1) Hbv Apr. 1993 (ViralProj15428/hbv1)
(hbv1) Head Louse (Pediculus humanus) (PhumU1) Hedgehog June 2006
(Broad/eriEur1) (eriEur1) Hedgehog May 2012 (EriEur2.0/eriEur2) (eriEur2)
Helicobacter acinonychis str. Sheeba (heliAcin_SHEEBA) Helicobacter hepaticus
ATCC 51449 (heliHepa) Helicobacter pylori 26695 (heliPylo_26695) Helicobacter
pylori HPAG1 (heliPylo_HPAG1) Helicobacter pylori J99 (heliPylo_J99)
Heliobacterium modesticaldum Ice1 (13427) Herminiimonas arsenicoxydans
(hermArse) Herpetosiphon aurantiacus ATCC 23779 (16523) Hg19 lgg inversion Mar
2013 (1/hg19LggInv) (hg19LggInv) Hlaref Apr. 2012 (hlaRefV1/hlaRef1) (hlaRef1)
Hlaref Apr. 2012 (hlaRefV2/hlaRef2) (hlaRef2) Hlaref Apr. 2012
(hlaRefV3/hlaRef3) (hlaRef3) Hominidae Apr. 24. 2006 (UCSC Recon/homIni13)
(homIni13) Hominidae Oct. 1. 2006 (UCSC Recon/homIni14) (homIni14) Homo sapiens
(hg19 with mtDNA replaced with rCRS) (Homo_sapiens_nuHg19_mtrCRS) Homo sapiens
(hg19 with mtDNA replaced with rCRS, and containing pUC18 and phiX174)
(hg19_rCRS_pUC18_phiX174) Homo sapiens b37 (hg_g1k_v37) Homo sapiens
hydatidiform mole assembly chm1 June 2013 (1/CHM1) (CHM1) Honeybee (Apis
mellifera): apiMel3 (apiMel3) Horse Jan. 2007 (Broad/equCab1) (equCab1) Horse
Jan. 2018 (EquCab3.0/equCab3) (equCab3) Horse Sep. 2007 (Broad/equCab2)
(equCab2) Hpv Aug. 2002 (ViralProj15424/hpv1) (hpv1) Human ANGIE TEST Dec. 2013
(GRCh38/grcHhh38) (grcHhh38) Human ANGIE TEST Dec. 2017 (GRCh38.p12/grcH38P12)
(grcH38P12) Human ANGIE TEST Jun. 2017 (GRCh38.p11/grcH38P11) (grcH38P11) Human
Apr. 2003 (NCBI33/hg15) (hg15) Human CHM13 2.0 (T2T Consortium) Jan. 2022 Human
Dec. 2013 (GRCh38/hg38) (hg38) Human Feb. 2009 (GRCh37/hg19) (hg19) Human July
2003 (NCBI34/hg16) (hg16) Human Mar. 2006 (NCBI36/hg18) (hg18) Human May 2004
(NCBI35/hg17) (hg17) Human herpesvirus 1 (15217) Human repeats Nov. 2012
(1/repeats2) (repeats2) Hydra magnipapillata str. 105 (Hydra_JCVI) Hyperthermus
butylicus DSM 5456 (hypeButy1) Hyphomonas neptunium ATCC 15444
(hyphNept_ATCC15444) Idiomarina loihiensis L2TR (idioLoih_L2TR) Ignicoccus
hospitalis KIN4/I (13914) Indian false vampire Sep. 2013 (ASM46534v1/megLyr1)
(megLyr1) J. Craig Venter Sep. 2007 (HuRef/venter1) (venter1) Jannaschia sp.
CCS1 (jannCCS1) Janthinobacterium sp. Marseille (16549) Japanese quail 26
Jul-2013 (Coja_1.0/cotJap1) (cotJap1) Japanese quail Mar. 2016 (Coturnix
japonica 2.0/cotJap2) (cotJap2) Kangaroo rat Dec. 2014 (Dord_2.0/dipOrd2)
(dipOrd2) Kangaroo rat Jul. 2008 (Broad/dipOrd1) (dipOrd1) Killdeer Jun 2014
(ASM70802v1/chaVoc1) (chaVoc1) Killer whale Jan. 2013 (Oorc_1.1/orcOrc1)
(orcOrc1) Kineococcus radiotolerans SRS30216 (10689) Kirref Apr. 2011
(kirRef/kirRef) (kirRef) Kirrefv2 Apr. 2011 (kirRefV2/kirRefV2) (kirRefV2)
Kirrefv3 Apr. 2011 (kirRefV3/kirRefV3) (kirRefV3) Kirrefv4 Apr. 2011
(kirRefV4/kirRefV4) (kirRefV4) Kirrefv5 Apr. 2011 (kirRefV5/kirRefV5) (kirRefV5)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (31) Koala (Phascolarctos
cinereus): phaCin_unsw_v4.1 (GCF_002099425.1) Korean Man (Homo_sapiens_AK1)
Lactobacillus acidophilus NCFM (82) Lactobacillus brevis ATCC 367 (404)
Lactobacillus casei ATCC 334 (402) Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842 (16871) Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
(403) Lactobacillus gasseri ATCC 33323 (84) Lactobacillus helveticus DPC 4571
(17811) Lactobacillus johnsonii NCC 533 (9638) Lactobacillus plantarum WCFS1
(lactPlan) Lactobacillus reuteri F275 (15766) Lactobacillus sakei subsp. sakei
23K (13435) Lactobacillus salivarius UCC118 (lactSali_UCC118) Lactococcus lactis
subsp. cremoris MG1363 (18797) Lactococcus lactis subsp. cremoris SK11 (401)
Lactococcus lactis subsp. lactis Il1403 (lactLact) Lamprey Dec. 2017
(Pmar_germline 1.0/petMar3) (petMar3) Lamprey Mar. 2007 (WUGSC 3.0/petMar1)
(petMar1) Lamprey Sep. 2010 (WUGSC 7.0/petMar2) (petMar2) Lancelet Apr. 2008
(JGI v2.0/braFlo2) (braFlo2) Lancelet Mar. 2006 (JGI 1.0/braFlo1) (braFlo1)
Laurasiatheria Apr. 24. 2006 (UCSC Recon/lauRas13) (lauRas13) Lawsonia
intracellularis PHE/MN1-00 (lawsIntr_PHE_MN1_00) Legionella pneumophila str.
Corby (17491) Legionella pneumophila str. Lens (13126) Legionella pneumophila
str. Paris (13127) Legionella pneumophila subsp. pneumophila str. Philadelphia 1
(legiPneu_PHILADELPHIA) Leifsonia xyli subsp. xyli str. CTCB07
(leifXyli_XYLI_CTCB0) Leishmania major 2005 (lMaj5) Leptospira borgpetersenii
serovar Hardjo-bovis JB197 (16148) Leptospira borgpetersenii serovar
Hardjo-bovis L550 (16146) Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130 (10687) Leptospira interrogans serovar Lai str. 56601 (leptInte)
Leptothrix cholodnii SP-6 (20039) Lesser Egyptian jerboa May 2012
(JacJac1.0/jacJac1) (jacJac1) Leuconostoc citreum KM20 (16062) Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293 (leucMese_ATCC8293) Limpet Jul.
2013 (lotGig0/lotGig0) (lotGig0) Listeria innocua Clip11262 (listInno) Listeria
monocytogenes EGD-e (276) Listeria monocytogenes str. 4b F2365 (85) Listeria
welshimeri serovar 6b str. SLCC5334 (13443) Lizard Feb. 2007 (Broad/anoCar1)
(anoCar1) Lizard May 2010 (Broad AnoCar2.0/anoCar2) (anoCar2) Lysinibacillus
sphaericus C3-41 (19619) M. domestica 22 Apr 2013
(Musca_domestica-2.0.2/musDom2) (musDom2) M. hapla Sep. 2008 (M. hapla VW9
WS210/melHap1) (melHap1) M. incognita Feb. 2008 (M. incognita WS210/melInc1)
(melInc1) M. incognita Feb. 2008 (M. incognita WS245/PRJEA28837/melInc2)
(melInc2) MMTV Nov. 2009 (MMTV/mmtv) (mmtv) Ma's night monkey Jun. 2017
(Anan_2.0/aotNan1) (aotNan1) Magnetococcus sp. MC-1 (magnMC1) Magnetospirillum
magneticum AMB-1 (magnMagn_AMB_1) Maize (Zea mays) (Zea_mays_B73_RefGen_v2)
Malayan flying lemur Jun. 2014 (G_variegatus-3.0.2/galVar1) (galVar1) Mallard
duck Apr 2013 (BGI_duck_1.0/anaPla1) (anaPla1) Manatee Oct. 2011 (Broad
v1.0/triMan1) (triMan1) Mannheimia succiniciproducens MBEL55E (mannSucc_MBEL55E)
Marburg virus Sep. 2014 (NC_024781.1/marVir1) (marVir1) Maricaulis maris MCS10
(mariMari_MCS10) Marinobacter aquaeolei VT8 (mariAqua_VT8) Marinomonas sp. MWYL1
(17445) Marmoset June 2007 (WUGSC 2.0.2/calJac1) (calJac1) Marmoset March 2009
(WUGSC 3.2/calJac3) (calJac3) Medaka Apr. 2006 (NIG/UT MEDAKA1/oryLat1)
(oryLat1) Medaka Oct. 2005 (NIG/UT MEDAKA1/oryLat2) (oryLat2) Medium ground
finch Apr. 2012 (GeoFor_1.0/geoFor1) (geoFor1) Megabat Jul. 2008 (Broad/pteVam1)
(pteVam1) Mesoplasma florum L1 (mesoFlor_L1) Mesorhizobium loti MAFF303099
(mesoLoti) Mesorhizobium sp. BNC1 (10690) Metallosphaera sedula DSM 5348
(metaSedu) Methanobrevibacter smithii ATCC 35061 (methSmit1) Methanocaldococcus
jannaschii DSM 2661 (methJann1) Methanococcoides burtonii DSM 6242 (methBurt2)
Methanococcus aeolicus Nankai-3 (methAeol1) Methanococcus maripaludis C5
(methMari_C5_1) Methanococcus maripaludis C6 (19639) Methanococcus maripaludis
C7 (methMari_C7) Methanococcus maripaludis S2 (metMar1) Methanococcus vannielii
SB (methVann1) Methanocorpusculum labreanum Z (methLabrZ_1) Methanoculleus
marisnigri JR1 (mculMari1) Methanopyrus kandleri AV19 (methKand1) Methanosaeta
thermophila PT (methTherPT1) Methanosarcina acetivorans C2A (metAce1)
Methanosarcina barkeri str. Fusaro (methBark1) Methanosarcina mazei Go1
(methMaze1) Methanosphaera stadtmanae DSM 3091 (methStad1) Methanospirillum
hungatei JF-1 (methHung1) Methanothermobacter thermautotrophicus str. Delta H
(methTher1) Methylibium petroleiphilum PM1 (methPetr_PM1) Methylobacillus
flagellatus KT (methFlag_KT) Methylobacterium extorquens PA1 (18637)
Methylobacterium radiotolerans JCM 2831 (18817) Methylobacterium sp. 4-46
(18809) Methylococcus capsulatus str. Bath (methCaps_BATH) Mexican tetra
(cavefish) Apr 2013 (Astyanax_mexicanus-1.0.2/astMex1) (astMex1) Mhcref Apr.
2011 (mhcRefnoNsV2/mhcRefnoNs2) (mhcRefnoNs2) Mhcref Jan. 2011 (mhcRefV1/mhcRef)
(mhcRef) Mhcref July 2011 (mhcRefnoNsV10/mhcRefnoNs10) (mhcRefnoNs10) Mhcref
July 2011 (mhcRefnoNsV11/mhcRefnoNs11) (mhcRefnoNs11) Mhcref July 2011
(mhcRefnoNsV12/mhcRefnoNs12) (mhcRefnoNs12) Mhcref July 2011
(mhcRefnoNsV13/mhcRefnoNs13) (mhcRefnoNs13) Mhcref July 2011
(mhcRefnoNsV14/mhcRefnoNs14) (mhcRefnoNs14) Mhcref July 2011
(mhcRefnoNsV15/mhcRefnoNs15) (mhcRefnoNs15) Mhcref July 2011
(mhcRefnoNsV16/mhcRefnoNs16) (mhcRefnoNs16) Mhcref July 2011
(mhcRefnoNsV17/mhcRefnoNs17) (mhcRefnoNs17) Mhcref July 2011
(mhcRefnoNsV5/mhcRefnoNs5) (mhcRefnoNs5) Mhcref July 2011
(mhcRefnoNsV6/mhcRefnoNs6) (mhcRefnoNs6) Mhcref July 2011
(mhcRefnoNsV7/mhcRefnoNs7) (mhcRefnoNs7) Mhcref July 2011
(mhcRefnoNsV8/mhcRefnoNs8) (mhcRefnoNs8) Mhcref July 2011
(mhcRefnoNsV8/mhcRefnoNs9) (mhcRefnoNs9) Mhcref June 2011
(mhcRefnoNsV1/mhcRefnoNs) (mhcRefnoNs) Mhcref June 2011
(mhcRefnoNsV3/mhcRefnoNs3) (mhcRefnoNs3) Mhcref June 2011
(mhcRefnoNsV4/mhcRefnoNs4) (mhcRefnoNs4) Mhcref Mar. 2012
(mhcRefnoNsV22/mhcRefnoNs22) (mhcRefnoNs22) Mhcref Mar. 2012
(mhcRefnoNsV23/mhcRefnoNs23) (mhcRefnoNs23) Mhcref Mar. 2012
(mhcRefnoNsV24/mhcRefnoNs24) (mhcRefnoNs24) Mhcref Oct. 2011
(mhcRefnoNsV18/mhcRefnoNs18) (mhcRefnoNs18) Mhcref Oct. 2011
(mhcRefnoNsV19/mhcRefnoNs19) (mhcRefnoNs19) Mhcref Oct. 2011
(mhcRefnoNsV20/mhcRefnoNs20) (mhcRefnoNs20) Mhcref Oct. 2011
(mhcRefnoNsV21/mhcRefnoNs21) (mhcRefnoNs21) Microbat Jul. 2010 (Broad Institute
Myoluc2.0/myoLuc2) (myoLuc2) Microbat Mar. 2006 (Broad/myoLuc1) (myoLuc1)
Microcystis aeruginosa NIES-843 (27835) Microworm Feb. 2013
(WS240/Pred3/panRed1) (panRed1) Minke whale Oct. 2013 (BalAcu1.0/balAcu1)
(balAcu1) Mm10haps Dec. 2011 (Mouse strains/mm10Strains1) (mm10Strains1)
Moorella thermoacetica ATCC 39073 (moorTher_ATCC39073) Mosquito (Aedes aegypti)
(AaegL1) Mosquito (Anopheles gambiae) (AgamP3) Mosquito (Culex quinquefasciatus)
(CpipJ1) Mouse Aug. 2005 (NCBI35/mm7) (mm7) Mouse Aug. 2018 (GRCm38B/GRCm38B)
(GRCm38B) Mouse Dec. 2011 (GRCm38/mm10) (mm10) Mouse Feb. 2006 (NCBI36/mm8)
(mm8) Mouse July 2007 (NCBI37/mm9) (mm9) Mouse May 2004 (mm5) Mouse lemur Feb.
2017 (Mmur_3.0/micMur3) (micMur3) Mouse lemur Jul. 2007 (Broad/micMur1)
(micMur1) Mouse lemur May 2015 (Mouse lemur/micMur2) (micMur2) Mycobacterium
abscessus (15691) Mycobacterium avium 104 (88) Mycobacterium avium subsp.
paratuberculosis K-10 (91) Mycobacterium bovis AF2122/97 (89) Mycobacterium
bovis BCG str. Pasteur 1173P2 (18059) Mycobacterium gilvum PYR-GCK (15760)
Mycobacterium leprae TN (90) Mycobacterium smegmatis str. MC2 155 (92)
Mycobacterium sp. JLS (16079) Mycobacterium sp. KMS (16081) Mycobacterium sp.
MCS (15762) Mycobacterium tuberculosis CDC1551 (223) Mycobacterium tuberculosis
F11 (15642) Mycobacterium tuberculosis H37Ra (18883) Mycobacterium tuberculosis
H37Rv (mycoTube_H37RV) Mycobacterium ulcerans Agy99 (16230) Mycobacterium
vanbaalenii PYR-1 (15761) Mycoplasma agalactiae PG2 (16095) Mycoplasma
capricolum subsp. capricolum ATCC 27343 (16208) Mycoplasma gallisepticum R (409)
Mycoplasma genitalium G37 (mycoGeni) Mycoplasma hyopneumoniae 232 (13120)
Mycoplasma hyopneumoniae 7448 (10639) Mycoplasma hyopneumoniae J (10675)
Mycoplasma mobile 163K (10697) Mycoplasma mycoides subsp. mycoides SC str. PG1
(10616) Mycoplasma penetrans HF-2 (176) Mycoplasma pneumoniae M129 (99)
Mycoplasma pulmonis UAB CTIP (100) Mycoplasma synoviae 53 (10676) Myxococcus
xanthus DK 1622 (myxoXant_DK_1622) N. americanus Dec. 2013
(WS242/N_americanus_v1/necAme1) (necAme1) Naked mole-rat Jan. 2012 (Broad
HetGla_female_1.0/hetGla2) (hetGla2) Naked mole-rat Jul. 2011 (BGI
HetGla_1.0/hetGla1) (hetGla1) Nanoarchaeum equitans Kin4-M (nanEqu1)
Natronomonas pharaonis DSM 2160 (natrPhar1) Neisseria gonorrhoeae FA 1090
(neisGono_FA1090_1) Neisseria meningitidis 053442 (16393) Neisseria meningitidis
FAM18 (neisMeni_FAM18_1) Neisseria meningitidis MC58 (neisMeni_MC58_1) Neisseria
meningitidis Z2491 (neisMeni_Z2491_1) Neorickettsia sennetsu str. Miyayama
(neorSenn_MIYAYAMA) Nile tilapia Jan. 2011 (Broad oreNil1.0/oreNil1) (oreNil1)
Nile tilapia Jan. 2011 (Broad oreNil1.1/oreNil2) (oreNil2) Nile tilapia Nov.
2016 (ASM185804v2/oreNil3) (oreNil3) Nitratiruptor sp. SB155-2 (18963)
Nitrobacter hamburgensis X14 (13473) Nitrobacter winogradskyi Nb-255
(nitrWino_NB_255) Nitrosococcus oceani ATCC 19707 (nitrOcea_ATCC19707)
Nitrosomonas europaea ATCC 19718 (nitrEuro) Nitrosomonas eutropha C91 (13913)
Nitrosopumilus maritimus SCM1 (19265) Nitrosospira multiformis ATCC 25196
(nitrMult_ATCC25196) Nocardia farcinica IFM 10152 (nocaFarc_IFM10152)
Nocardioides sp. JS614 (nocaJS61) Non-Afrotheria Apr. 24. 2006 (UCSC
Recon/nonAfr13) (nonAfr13) Northern pike Jul 2014 (EsoLuc1.0/esoLuc1) (esoLuc1)
Nostoc sp. PCC 7120 (nostSp) Notfound PATCH Jun. 2013 (GRCh37.p13/grcH37P13)
(grcH37P13) Notyet Oct. 2011 (notYet1/calMil0) (calMil0) Novosphingobium
aromaticivorans DSM 12444 (novoArom_DSM12444) O. volvulus Nov. 2013
(WS241/O_volvulus_Cameroon_v3/oncVol1) (oncVol1) Oceanobacillus iheyensis HTE831
(oceaIhey) Ochrobactrum anthropi ATCC 49188 (19485) Oenococcus oeni PSU-1
(oenoOeni_PSU_1) Onion yellows phytoplasma OY-M (onioYell_PHYTOPLASMA) Opossum
Jan. 2006 (Broad/monDom4) (monDom4) Opossum Oct. 2004 (Broad prelim/monDom1)
(monDom1) Opossum Oct. 2006 (Broad/monDom5) (monDom5) Orangutan Jan. 2018
(Susie_PABv2/ponAbe3) (ponAbe3) Orangutan July 2007 (WUGSC 2.0.2/ponAbe2)
(ponAbe2) Orientia tsutsugamushi str. Boryong (orieTsut_BORYONG) Oxytricha
trifallax Sep. 2015 (WashU ASM129792v1/oxyTri2) (oxyTri2) P. exspectatus Mar.
2014 (WS243/P_exspectatus_v1/priExs1) (priExs1) P. falciparum Plasmodium
falciparum (?/falciparum) (falciparum) P. pacificus Aug. 2014
(WS221/P_pacificus-v2/priPac3) (priPac3) P. pacificus Dec. 2008 (WUGSC
5.0.1/priPac2) (priPac2) P. pacificus Feb. 2007 (WUGSC 5.0/priPac1) (priPac1)
Pacific walrus Jan 2013 (Oros_1.0/odoRosDiv1) (odoRosDiv1) Painted turtle Dec.
2011 (v3.0.1/chrPic1) (chrPic1) Painted turtle Mar. 2014 (v3.0.3/chrPic2)
(chrPic2) Panda Dec. 2009 (BGI-Shenzhen 1.0/ailMel1) (ailMel1) Parabacteroides
distasonis ATCC 8503 (13485) Paracoccus denitrificans PD1222 (paraDeni_PD1222)
Parnell's mustached bat Sep. 2013 (ASM46540v1/ptePar1) (ptePar1) Parrot Jan.
2013 (AV1/amaVit1) (amaVit1) Parvibaculum lavamentivorans DS-1 (17639)
Pasteurella multocida subsp. multocida str. Pm70 (pastMult) Pectobacterium
atrosepticum SCRI1043 (erwiCaro_ATROSEPTICA) Pediococcus pentosaceus ATCC 25745
(pediPent_ATCC25745) Pelobacter carbinolicus DSM 2380 (peloCarb) Pelobacter
propionicus DSM 2379 (13384) Pelodictyon luteolum DSM 273 (peloLute_DSM273)
Pelotomaculum thermopropionicum SI (peloTher_SI) Petrotoga mobilis SJ95 (17679)
Photobacterium profundum SS9 (photProf_SS9) Photorhabdus luminescens subsp.
laumondii TTO1 (photLumi) Picrophilus torridus DSM 9790 (picrTorr1) Pig Apr.
2009 (SGSC 9.53/susScr1) (susScr1) Pig Aug. 2011 (SGSC Sscrofa10.2/susScr3)
(susScr3) Pig Feb. 2017 (Sscrofa11.1/susScr11) (susScr11) Pig May 2010
(Sscrofa9.58) Pig Nov. 2009 (SGSC Sscrofa9.2/susScr2) (susScr2) Pig roundworm
Sep. 2012 (WS229/AscSuum_1.0/ascSuu1) (ascSuu1) Pig-tailed macaque Mar. 2015
(Mnem_1.0/macNem1) (macNem1) Pika Jul. 2008 (Broad/ochPri2) (ochPri2) Pika May
2012 (OchPri3.0/ochPri3) (ochPri3) Pine wood nematode Nov. 2011 (WS229/B.
xylophilus Ka4C1/burXyl1) (burXyl1) Plasmodium falciparum 3d7 10 Sept 2014
(V12.0/plasFalc3D7V12) (plasFalc3D7V12) Platypus Feb. 2007 (ASM227v2/ornAna2)
(ornAna2) Platypus Mar. 2007 (WUGSC 5.0.1/ornAna1) (ornAna1) Polar bear 09
May-2014 (UrsMar_1.0/ursMar1) (ursMar1) Polaromonas naphthalenivorans CJ2
(13418) Polaromonas sp. JS666 (polaJS66) Polynucleobacter sp. QLW-P1DMWA-1
(polyQLWP) Poplar (Populus trichocarpa) (Ptrichocarpa_156) Porphyromonas
gingivalis W83 (porpGing_W83) Prairie deer mouse Dec. 2013 (Pman_1.0/perManBai1)
(perManBai1) Prairie vole Oct. 2012 (MicOch1.0/micOch1) (micOch1) Primate Apr.
24. 2006 (UCSC Recon/priMat13) (priMat13) Princess of Burundi May 2011
(NeoBri1.0/neoBri1) (neoBri1) Proboscis monkey Nov. 2014 (Charlie1.0/nasLar1)
(nasLar1) Prochlorococcus marinus str. AS9601 (13548) Prochlorococcus marinus
str. MIT 9211 (13551) Prochlorococcus marinus str. MIT 9215 (18633)
Prochlorococcus marinus str. MIT 9301 (15746) Prochlorococcus marinus str. MIT
9303 (13496) Prochlorococcus marinus str. MIT 9312 (13910) Prochlorococcus
marinus str. MIT 9313 (220) Prochlorococcus marinus str. MIT 9515 (13617)
Prochlorococcus marinus str. NATL1A (15660) Prochlorococcus marinus str. NATL2A
(13911) Prochlorococcus marinus subsp. marinus str. CCMP1375 (procMari_CCMP1375)
Prochlorococcus marinus subsp. pastoris str. CCMP1986 (213) Propionibacterium
acnes KPA171202 (propAcne_KPA171202) Prosthecochloris vibrioformis DSM 265
(12607) Przewalski horse Jun 2014 (Burgud/equPrz1) (equPrz1) Pseudoalteromonas
atlantica T6c (13454) Pseudoalteromonas haloplanktis TAC125 (pseuHalo_TAC125)
Pseudomonas aeruginosa PA7 (16720) Pseudomonas aeruginosa PAO1 (pseuAeru)
Pseudomonas aeruginosa UCBPP-PA14 (386) Pseudomonas entomophila L48 (16800)
Pseudomonas fluorescens Pf-5 (327) Pseudomonas fluorescens PfO-1 (12)
Pseudomonas mendocina ymp (17457) Pseudomonas putida F1 (13909) Pseudomonas
putida GB-1 (17629) Pseudomonas putida KT2440 (267) Pseudomonas putida W619
(17053) Pseudomonas stutzeri A1501 (16817) Pseudomonas syringae pv. phaseolicola
1448A (12416) Pseudomonas syringae pv. syringae B728a (323) Pseudomonas syringae
pv. tomato str. DC3000 (359) Psychrobacter arcticus 273-4 (psycArct_273_4)
Psychrobacter cryohalolentis K5 (13920) Psychrobacter sp. PRwf-1 (15759)
Psychromonas ingrahamii 37 (psycIngr_37) Pundamilia nyererei Oct 2011
(PunNye1.0/punNye1) (punNye1) Purple Sea Urchin (Strongylocentrotus purpuratus)
v2.6 (Spur_v2.6) Pyrobaculum aerophilum str. IM2 (pyrAer1) Pyrobaculum
arsenaticum DSM 13514 (pyroArse1) Pyrobaculum calidifontis JCM 11548 (pyroCali1)
Pyrobaculum islandicum DSM 4184 (pyroIsla1) Pyrococcus abyssi GE5 (pyrAby1)
Pyrococcus furiosus DSM 3638 (pyrFur2) Pyrococcus horikoshii OT3 (pyrHor1)
Rabbit Apr. 2009 (Broad/oryCun2) (oryCun2) Rabbit May 2005 (Broad/oryCun1)
(oryCun1) Ralstonia eutropha H16 (13603) Ralstonia eutropha JMP134
(ralsEutr_JMP134) Ralstonia metallidurans CH34 (250) Ralstonia solanacearum
GMI1000 (ralsSola) Rat Jul. 2014 (RGSC 6.0/rn6) (rn6) Rat June 2003 (Baylor
3.1/rn3) (rn3) Rat Mar. 2012 (RGSC 5.0/rn5) (rn5) Rat May. 2019 (Regen
Rn0/regenRn0) (regenRn0) Rat Nov. 2004 (Baylor 3.4/rn4) (rn4) Red Flour Beetle
(Tribolium castaneum) (Tcas_3.0) Renibacterium salmoninarum ATCC 33209 (19227)
RepBase Jun. 2012 (hg19/repBase0) (repBase0) RepBase Sep. 2012 (17.08/repBase1)
(repBase1) Reston ebolavirus Aug. 2014 (NC_004161.1/resEbo1) (resEbo1) Rhesus
Feb. 2019 (Mmul_10/rheMac10) (rheMac10) Rhesus Jan. 2006 (MGSC Merged
1.0/rheMac2) (rheMac2) Rhesus Nov. 2014 (UMD MacaM_Assembly_v7/rheMac7)
(rheMac7) Rhesus Nov. 2015 (BCM Mmul_8.0.1/rheMac8) (rheMac8) Rhesus Oct. 2010
(BGI CR_1.0/rheMac3) (rheMac3) Rhizobium etli CFN 42 (rhizEtli_CFN_42) Rhizobium
leguminosarum bv. viciae 3841 (344) Rhodobacter sphaeroides 2.4.1
(rhodSpha_2_4_1) Rhodobacter sphaeroides ATCC 17025 (15755) Rhodobacter
sphaeroides ATCC 17029 (15754) Rhodococcus sp. RHA1 (rhodRHA1) Rhodoferax
ferrireducens T118 (13908) Rhodopirellula baltica SH 1 (pireSp) Rhodopseudomonas
palustris BisA53 (15751) Rhodopseudomonas palustris BisB18 (15750)
Rhodopseudomonas palustris BisB5 (15749) Rhodopseudomonas palustris CGA009
(rhodPalu_CGA009) Rhodopseudomonas palustris HaA2 (15747) Rhodospirillum rubrum
ATCC 11170 (rhodRubr_ATCC11170) Rice (Oryza sativa ssp. japonica var.
Nipponbare) (oryza_sativa_japonica_nipponbare_IRGSP4.0) Rickettsia akari str.
Hartford (12953) Rickettsia bellii OSU 85-389 (17237) Rickettsia bellii RML369-C
(rickBell_RML369_C) Rickettsia canadensis str. McKiel (12952) Rickettsia conorii
str. Malish 7 (42) Rickettsia felis URRWXCal2 (13884) Rickettsia massiliae MTU5
(18271) Rickettsia prowazekii str. Madrid E (43) Rickettsia rickettsii str.
'Sheila Smith' (9636) Rickettsia rickettsii str. Iowa (19943) Rickettsia typhi
str. Wilmington (10679) Rock hyrax Jul. 2008 (Broad/proCap1) (proCap1) Rock
pigeon Feb 2013 (Cliv_1.0/colLiv1) (colLiv1) Rodent Apr. 24. 2006 (UCSC
Recon/rodEnt13) (rodEnt13) Roseiflexus castenholzii DSM 13941 (13462)
Roseiflexus sp. RS-1 (16190) Roseobacter denitrificans OCh 114
(roseDeni_OCH_114) Rubrobacter xylanophilus DSM 9941 (rubrXyla_DSM9941) S.
cerevisae str. S288C (Saccharomyces_cerevisiae_S288C_SGD2010) S. cerevisiae Apr.
2011 (SacCer_Apr2011/sacCer3) (sacCer3) S. cerevisiae June 2008 (SGD/sacCer2)
(sacCer2) S. cerevisiae Oct. 2003 (SGD/sacCer1) (sacCer1) S. purpuratus Apr.
2005 (Baylor 1.1/strPur1) (strPur1) S. purpuratus Feb. 2009 (BCM-HGSC
Spur_v2.5/strPur3) (strPur3) S. purpuratus Jun. 2011 (BCM-HGSC
Spur_v3.1/strPur4) (strPur4) S. purpuratus Sep. 2006 (Baylor 2.1/strPur2)
(strPur2) SARS coronavirus Apr. 2003 (GenBank Apr. 14 '03/sc1) (sc1)
Saccharophagus degradans 2-40 (saccDegr_2_40) Saccharopolyspora erythraea NRRL
2338 (saccEryt_NRRL_2338) Saker falcon Feb 2013 (F_cherrug_v1.0/falChe1)
(falChe1) Salinibacter ruber DSM 13855 (saliRube_DSM13855) Salinispora arenicola
CNS-205 (17109) Salinispora tropica CNB-440 (saliTrop_CNB_440) Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- (13030) Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67 (9618) Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150 (salmEnte_PARATYPI_ATC) Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7 (27803) Salmonella
enterica subsp. enterica serovar Typhi str. CT18 (salmTyph) Salmonella enterica
subsp. enterica serovar Typhi str. Ty2 (salmTyph_TY2) Salmonella typhimurium LT2
(241) Saltwater crocodile June 2011 (UCSC cPoro_v0.1c45/croPor0) (croPor0)
Scarlet macaw Jun 2013 (SMACv1.1/araMac1) (araMac1) Sclater's lemur Aug. 2015
(Eflavifronsk33QCA/eulFla1) (eulFla1) Sea hare Jul. 2013 (aplCal0/aplCal0)
(aplCal0) Sea hare Sept. 2008 (Broad 2.0/aplCal1) (aplCal1) Serratia
proteamaculans 568 (17459) Sheep Aug. 2012 (ISGC Oar_v3.1/oviAri3) (oviAri3)
Sheep Feb. 2010 (ISGC Ovis_aries_1.0/oviAri1) (oviAri1) Sheep Nov. 2015
(Oar_v4.0/oviAri4) (oviAri4) Sheepshead minnow Jul 2014
(C_variegatus-1.0/cypVar1) (cypVar1) Shewanella amazonensis SB2B (shewAmaz)
Shewanella baltica OS155 (shewBalt) Shewanella baltica OS185 (17643) Shewanella
baltica OS195 (13389) Shewanella denitrificans OS217 (shewDeni) Shewanella
frigidimarina NCIMB 400 (shewFrig) Shewanella halifaxensis HAW-EB4 (20241)
Shewanella loihica PV-4 (shewLoihPV4) Shewanella oneidensis MR-1 (shewOnei)
Shewanella pealeana ATCC 700345 (17415) Shewanella putrefaciens CN-32
(shewPutrCN32) Shewanella sediminis HAW-EB3 (18789) Shewanella sp. ANA-3
(shewANA3) Shewanella sp. MR-4 (shewMR4) Shewanella sp. MR-7 (shewMR7)
Shewanella sp. W3-18-1 (shewW318) Shewanella woodyi ATCC 51908 (17455) Shigella
boydii Sb227 (13146) Shigella dysenteriae Sd197 (13145) Shigella flexneri 2a
str. 2457T (408) Shigella flexneri 2a str. 301 (shigFlex_2A) Shigella flexneri 5
str. 8401 (16375) Shigella sonnei Ss046 (13151) Shrew Aug. 2008 (Broad/sorAra2)
(sorAra2) Shrew June 2006 (Broad/sorAra1) (sorAra1) Silicibacter pomeroyi DSS-3
(siliPome_DSS_3) Silicibacter sp. TM1040 (13040) Silkworm (Bombyx_mori_p50T_2.0)
Simhumanmammal Oct. 2011 (simHumanMammal/simHumanMammal) (simHumanMammal) Simmam
Jan. 2011 (SimMamV1/simHumanMam) (simHumanMam) Simprim Jan. 2011
(SimPrimV1/simHumanPrim) (simHumanPrim) Simrefmam Jan. 2011
(SimRefMamV1/simRefMam) (simRefMam) Sinorhizobium medicae WSM419 (16304)
Sinorhizobium meliloti 1021 (sinoMeli) Sloth Jul. 2008 (Broad/choHof1) (choHof1)
Snail Jun. 2013 (bioGla0/bioGla0) (bioGla0) Sodalis glossinidius str.
'morsitans' (sodaGlos_MORSITANS) Solibacter usitatus Ellin6076
(soliUsit_ELLIN6076) Sooty mangabey Mar. 2015 (Caty_1.0/cerAty1) (cerAty1)
Sorangium cellulosum 'So ce 56' (28111) Southern platyfish Jan 2012
(Xiphophorus_maculatus-4.4.2/xipMac1) (xipMac1) Sperm whale Sep. 2013
(Physeter_macrocephalus-2.0.2/phyCat1) (phyCat1) Sphingomonas wittichii RW1
(17343) Sphingopyxis alaskensis RB2256 (sphiAlas_RB2256) Spiny softshell turtle
May 2013 (ASM38561v1/apaSpi1) (apaSpi1) Spotted gar Dec 2011 (LepOcu1/lepOcu1)
(lepOcu1) Squirrel Feb. 2008 (Broad/speTri1) (speTri1) Squirrel Nov. 2011
(Broad/speTri2) (speTri2) Squirrel monkey Oct. 2011 (Broad/saiBol1) (saiBol1)
Staph Feb. 2006 (ASM1342v1/staAur1) (staAur1) Staph Feb. 2006
(USA300_FPR3757/staAur2) (staAur2) Staphylococcus aureus RF122 (63)
Staphylococcus aureus subsp. aureus COL (238) Staphylococcus aureus subsp.
aureus JH1 (15758) Staphylococcus aureus subsp. aureus JH9 (15757)
Staphylococcus aureus subsp. aureus MRSA252 (265) Staphylococcus aureus subsp.
aureus MSSA476 (266) Staphylococcus aureus subsp. aureus MW2 (306)
Staphylococcus aureus subsp. aureus Mu3 (18509) Staphylococcus aureus subsp.
aureus Mu50 (stapAure_MU50) Staphylococcus aureus subsp. aureus N315 (264)
Staphylococcus aureus subsp. aureus NCTC 8325 (237) Staphylococcus aureus subsp.
aureus USA300 (16313) Staphylococcus aureus subsp. aureus USA300_TCH1516 (19489)
Staphylococcus aureus subsp. aureus str. Newman (18801) Staphylococcus
epidermidis ATCC 12228 (279) Staphylococcus epidermidis RP62A (64)
Staphylococcus haemolyticus JCSC1435 (12508) Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305 (15596) Staphylothermus marinus F1 (stapMari1)
Star-nosed mole Mar 2012 (ConCri1.0/conCri1) (conCri1) Starlet sea anemone Jun.
2007 (JGI-PDF/nemVec1) (nemVec1) Stickleback Feb. 2006 (Broad/gasAcu1) (gasAcu1)
Straw colored fruit bat 13 Sep 2013 (ASM46528v1/eidHel1) (eidHel1) Streptococcus
agalactiae 2603V/R (330) Streptococcus agalactiae A909 (326) Streptococcus
agalactiae NEM316 (334) Streptococcus gordonii str. Challis substr. CH1 (66)
Streptococcus mutans UA159 (333) Streptococcus pneumoniae D39 (16374)
Streptococcus pneumoniae Hungary19A-6 (28035) Streptococcus pneumoniae R6 (278)
Streptococcus pneumoniae TIGR4 (277) Streptococcus pyogenes M1 GAS
(strePyog_M1_GAS) Streptococcus pyogenes MGAS10270 (16364) Streptococcus
pyogenes MGAS10394 (12469) Streptococcus pyogenes MGAS10750 (16366)
Streptococcus pyogenes MGAS2096 (16365) Streptococcus pyogenes MGAS315 (311)
Streptococcus pyogenes MGAS5005 (13888) Streptococcus pyogenes MGAS6180 (13887)
Streptococcus pyogenes MGAS8232 (286) Streptococcus pyogenes MGAS9429 (16363)
Streptococcus pyogenes SSI-1 (301) Streptococcus pyogenes str. Manfredo (270)
Streptococcus sanguinis SK36 (13942) Streptococcus suis 05ZYH33 (17153)
Streptococcus suis 98HAH33 (17155) Streptococcus thermophilus CNRZ1066 (13163)
Streptococcus thermophilus LMD-9 (13773) Streptococcus thermophilus LMG 18311
(13162) Streptomyces avermitilis MA-4680 (189) Streptomyces coelicolor A3(2)
(streCoel) Sudan ebolavirus Aug. 2014 (NC_006432.1/sudEbo1) (sudEbo1) Sulfolobus
acidocaldarius DSM 639 (sulfAcid1) Sulfolobus solfataricus P2 (sulSol1)
Sulfolobus tokodaii str. 7 (sulfToko1) Sulfurimonas denitrificans DSM 1251
(thioDeni_ATCC33889) Sulfurovum sp. NBC37-1 (18965) Symbiobacterium thermophilum
IAM 14863 (symbTher_IAM14863) Synechococcus elongatus PCC 6301 (13282)
Synechococcus elongatus PCC 7942 (10645) Synechococcus sp. CC9311 (12530)
Synechococcus sp. CC9605 (13643) Synechococcus sp. CC9902 (13655) Synechococcus
sp. JA-2-3B'a(2-13) (16252) Synechococcus sp. JA-3-3Ab (16251) Synechococcus sp.
PCC 7002 (28247) Synechococcus sp. RCC307 (13654) Synechococcus sp. WH 7803
(13642) Synechococcus sp. WH 8102 (syneSp_WH8102) Synechocystis sp. PCC 6803
(synePCC6) Syntrophobacter fumaroxidans MPOB (syntFuma_MPOB) Syntrophomonas
wolfei subsp. wolfei str. Goettingen (syntWolf_GOETTINGEN) Syntrophus
aciditrophicus SB (syntAcid_SB) T. castaneum Sep. 2005 (Baylor 2.0/triCas2)
(triCas2) Tai forest ebolavirus Aug. 2014 (NC_014372.1/taiEbo1) (taiEbo1)
Tarsier Aug. 2008 (Broad/tarSyr1) (tarSyr1) Tarsier Sep. 2013
(Tarsius_syrichta-2.0.1/tarSyr2) (tarSyr2) Tasmanian devil Feb. 2011 (WTSI
Devil_ref v7.0/sarHar1) (sarHar1) Tenrec July 2005 (Broad/echTel1) (echTel1)
Tenrec Nov. 2012 (Broad/echTel2) (echTel2) Tetraodon Feb. 2004 (Genoscope
7/tetNig1) (tetNig1) Tetraodon Mar. 2007 (Genoscope 8.0/tetNig2) (tetNig2)
Theobroma cacao Dec 2010 (CIRAD/Theobroma cacao Belizian Criollo) (Tcacao_1.0)
Thermoanaerobacter pseudethanolicus ATCC 33223 (13901) Thermoanaerobacter sp.
X514 (16394) Thermoanaerobacter tengcongensis MB4 (therTeng) Thermobifida fusca
YX (therFusc_YX) Thermococcus kodakarensis KOD1 (therKoda1) Thermofilum pendens
Hrk 5 (therPend1) Thermoplasma acidophilum DSM 1728 (therAcid1) Thermoplasma
volcanium GSS1 (therVolc1) Thermosipho melanesiensis BI429 (17249)
Thermosynechococcus elongatus BP-1 (therElon) Thermotoga lettingae TMO (15644)
Thermotoga maritima MSB8 (therMari) Thermotoga petrophila RKU-1 (therPetr_RKU_1)
Thermotoga sp. RQ2 (19543) Thermus thermophilus HB27 (therTher_HB27) Thermus
thermophilus HB8 (therTher_HB8) Thiobacillus denitrificans ATCC 25259
(thioDeni_ATCC25259) Thiomicrospira crunogena XCL-2 (thioCrun_XCL_2) Threadworm
Apr. 2011 (WS226/S. ratti ED321/strRat1) (strRat1) Threadworm Sep. 2014 (S.
ratti ED321/strRat2) (strRat2) Tibetan antelope May 2013 (PHO1.0/panHod1)
(panHod1) Tibetan frog Mar. 2015 (BGI_ZX_2015/nanPar1) (nanPar1) Tibetan ground
jay Jan 2013 (PseHum1.0/pseHum1) (pseHum1) Tiger rockfish 22 Oct-2013
(Snig1.0/sebNig1) (sebNig1) Tongue sole 28 Jan-2014 (Cse_v1.0/cynSem1) (cynSem1)
Tree shrew Dec. 2006 (Broad/tupBel1) (tupBel1) Treponema denticola ATCC 35405
(4) Treponema pallidum subsp. pallidum str. Nichols (trepPall) Trichinella Jan.
2011 (WS225/Trichinella_spiralis-3.7.1/triSpi1) (triSpi1) Trichodesmium
erythraeum IMS101 (tricEryt_IMS101) Tropheryma whipplei TW08/27
(tropWhip_TW08_27) Tropheryma whipplei str. Twist (95) Turkey Dec. 2009 (TGC
Turkey_2.01/melGal1) (melGal1) Turkey Nov. 2014 (Turkey_5.0/melGal5) (melGal5)
Upper Galilee mountains blind mole rat Jun 2014 (S.galili_v1.0/nanGal1)
(nanGal1) Ureaplasma parvum serovar 3 str. ATCC 27815 (19087) Ureaplasma parvum
serovar 3 str. ATCC 700970 (ureaUrea) Verminephrobacter eiseniae EF01-2
(vermEise_EF01_2) Vibrio cholerae O1 biovar eltor str. N16961 (vibrChol1) Vibrio
cholerae O395 (vibrChol_O395_1) Vibrio fischeri ES114 (vibrFisc_ES114_1) Vibrio
harveyi ATCC BAA-1116 (19857) Vibrio parahaemolyticus RIMD 2210633 (vibrPara1)
Vibrio vulnificus CMCP6 (vibrVuln_CMCP6_1) Vibrio vulnificus YJ016
(vibrVuln_YJ016_1) Wallaby Nov. 2007 (Baylor 1.0/macEug1) (macEug1) Wallaby Sep.
2009 (TWGS Meug_1.1/macEug2) (macEug2) Water buffalo Sep. 2013
(UMD_CASPUR_WB_2.0/bubBub1) (bubBub1) Weddell seal Mar 2013 (LepWed1.0/lepWed1)
(lepWed1) Whipworm Jul. 2014 (WS243/T. suis DCEP-RM93M male/triSui1) (triSui1)
White rhinoceros May 2012 (CerSimSim1.0/cerSim1) (cerSim1) White throated
tinamou Jun 2014 (ASM70537v1/tinGut1) (tinGut1) White-faced sapajou Apr. 2016
(Cebus_imitator-1.0/cebCap1) (cebCap1) White-throated sparrow Apr 2013
(ASM38545v1/zonAlb1) (zonAlb1) Wigglesworthia glossinidia endosymbiont of
Glossina brevipalpis (wiggBrev) Wild yak Oct 2011 (BosGru_v2.0/bosMut1)
(bosMut1) Wolbachia endosymbiont of Drosophila melanogaster
(wolbEndo_OF_DROSOPHIL) Wolbachia endosymbiont strain TRS of Brugia malayi
(12475) Wolinella succinogenes DSM 1740 (woliSucc) X. tropicalis Aug. 2005 (JGI
4.1/xenTro2) (xenTro2) X. tropicalis Jul. 2016 (Xenopus_tropicalis_v9.1/xenTro9)
(xenTro9) X. tropicalis Nov. 2009 (JGI 4.2/xenTro3) (xenTro3) X. tropicalis Oct.
2004 (JGI 3.0/xenTro1) (xenTro1) X. tropicalis Sep. 2012 (JGI 7.0/xenTro7)
(xenTro7) Xanthobacter autotrophicus Py2 (15756) Xanthomonas axonopodis pv.
citri str. 306 (297) Xanthomonas campestris pv. campestris str. 8004 (15)
Xanthomonas campestris pv. campestris str. ATCC 33913 (xantCamp) Xanthomonas
campestris pv. vesicatoria str. 85-10 (13649) Xanthomonas oryzae pv. oryzae
KACC10331 (12931) Xanthomonas oryzae pv. oryzae MAFF 311018 (16297) Xanthomonas
oryzae pv. oryzae PXO99A (Xanthomonas_oryzae_PXO99A) Xylella fastidiosa 9a5c
(xyleFast) Xylella fastidiosa M12 (17823) Xylella fastidiosa Temecula1 (285)
Yangtze river dolphin 31 Jul 2013 (Lipotes_vexillifer_v1/lipVex1) (lipVex1)
Yellowbelly pufferfish May 2013 (version 1 of Takifugu flavidus genome/takFla1)
(takFla1) Yersinia enterocolitica subsp. enterocolitica 8081 (190) Yersinia
pestis Angola (16067) Yersinia pestis Antiqua (16645) Yersinia pestis CO92
(yersPest_CO92) Yersinia pestis KIM (288) Yersinia pestis Nepal516 (16646)
Yersinia pestis Pestoides F (16700) Yersinia pestis biovar Microtus str. 91001
(10638) Yersinia pseudotuberculosis IP 31758 (16070) Yersinia pseudotuberculosis
IP 32953 (12950) Yersinia pseudotuberculosis YPIII (28743) Zaire ebolavirus Aug.
2014 (NC_002549.1/zaiEbo1) (zaiEbo1) Zebra finch Feb. 2013 (WashU
taeGut324/taeGut2) (taeGut2) Zebra finch Jul. 2008 (WUGSC 3.2.4/taeGut1)
(taeGut1) Zebra mbuna Mar 2012 (MetZeb1.1/mayZeb1) (mayZeb1) Zebrafish Dec. 2008
(Zv8/danRer6) (danRer6) Zebrafish Jul. 2010 (Zv9/danRer7) (danRer7) Zebrafish
July 2007 (Zv7/danRer5) (danRer5) Zebrafish Mar. 2006 (Zv6/danRer4) (danRer4)
Zebrafish May 2005 (Zv5/danRer3) (danRer3) Zebrafish May 2017 (GRCz11/danRer11)
(danRer11) Zebrafish Sep. 2014 (GRCz10/danRer10) (danRer10) Zymomonas mobilis
subsp. mobilis ZM4 (zymoMobi_ZM4) chimp/human Jun. 2008 (UCSC Recon/homPan20)
(homPan20) hg19Haplotypes Feb. 2009 (GRCh37/hg19Haps) (hg19Haps) orang/human
Jun. 2008 (UCSC Recon/homIni20) (homIni20) pUC18 Plasmid (pUC18) phiX174 (phiX)
tarInv Dec. 2013 (GRCh38Tar/tarIhg38) (tarIhg38) uncultured methanogenic
archaeon RC-I (uncuMeth_RCI)
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Selectaffybatchanalyze75esetfpedfpheideaspreimzmlisa-jsonisa-tabldindeplpedludwig_modelmalistneostore.zipobfspbedppherdata.seshpsnpsiftdbnsfpspalndbaspalndbnpsplibvelvetwiffwiff2
Genome/Build:
unspecified (?)

unspecified (?) A. ceylanicum Mar. 2014 (WS243/Acey_2013.11.30.genDNA/ancCey1)
(ancCey1) A. gambiae Feb. 2003 (IAGEC MOZ2/anoGam1) (anoGam1) A. gambiae Oct.
2006 (AgamP3/anoGam3) (anoGam3) A. mellifera 04 Nov 2010 (Amel_4.5/apiMel4)
(apiMel4) A. mellifera Jan. 2005 (Baylor 2.0/apiMel2) (apiMel2) A. mellifera
July 2004 (Baylor 1.2/apiMel1) (apiMel1) A. mellifera Nov. 2010
(GCF_000002195.4/Amel_4.5) (Amel_4.5) Aardvark May 2012 (OryAfe1.0/oryAfe1)
(oryAfe1) Acaryochloris marina MBIC11017 (12997) Acholeplasma laidlawii PG-8A
(19259) Acidiphilium cryptum JF-5 (acidCryp_JF_5) Acidobacteria bacterium
Ellin345 (acidBact_ELLIN345) Acidothermus cellulolyticus 11B (acidCell_11B)
Acidovorax avenae subsp. citrulli AAC00-1 (15708) Acidovorax sp. JS42 (acidJS42)
Acinetobacter baumannii (13001) Acinetobacter baumannii (28921) Acinetobacter
baumannii ATCC 17978 (17477) Acinetobacter baumannii Oct. 2012
(aciBauTYTH_1/aciBauTYTH_1) (aciBauTYTH_1) Acinetobacter sp. ADP1 (acinSp_ADP1)
Actinobacillus pleuropneumoniae L20 (actiPleu_L20) Actinobacillus
pleuropneumoniae serovar 3 str. JL03 (19135) Actinobacillus succinogenes 130Z
(13370) Aeromonas hydrophila subsp. hydrophila ATCC 7966 (aeroHydr_ATCC7966)
Aeromonas salmonicida subsp. salmonicida A449 (16723) Aeropyrum pernix K1
(aerPer1) African clawed frog Aug. 2016 (Xenopus_laevis_v2/xenLae2) (xenLae2)
Afrotheria Apr. 24. 2006 (UCSC Recon/afrOth13) (afrOth13) Agrobacterium
tumefaciens str. C58 (283) Alcanivorax borkumensis SK2 (alcaBork_SK2)
Alkalilimnicola ehrlichei MLHE-1 (alkaEhrl_MLHE_1) Alkaliphilus metalliredigens
QYMF (13006) Alkaliphilus oremlandii OhILAs (16083) Alpaca Jul. 2008
(Broad/vicPac1) (vicPac1) Alpaca Mar. 2013 (Vicugna_pacos-2.0.1/vicPac2)
(vicPac2) Amazon molly 28 Oct-2013 (Poecilia_formosa-5.1.2/poeFor1) (poeFor1)
American alligator Aug. 2012 (allMis0.2/allMis1) (allMis1) American alligator
November 2011 (UCSC aMiss_v0.1c27/allMis0) (allMis0) Amur tiger 06 Sep 2013
(PanTig1.0/panTig1) (panTig1) Anabaena variabilis ATCC 29413
(anabVari_ATCC29413) Anaeromyxobacter dehalogenans 2CP-C (anaeDeha_2CP_C)
Anaeromyxobacter sp. Fw109-5 (17729) Anaplasma marginale str. St. Maries
(anapMarg_ST_MARIES) Anaplasma phagocytophilum HZ (336) Angolan colobus Mar.
2015 (Cang.pa_1.0/colAng1) (colAng1) Aquifex aeolicus VF5 (aquiAeol) Arabidopsis
lyrata (Araly1) Arabidopsis thaliana TAIR10 (Arabidopsis_thaliana_TAIR10)
(Arabidopsis_thaliana_TAIR10) Arabidopsis thaliana TAIR7 (araTha1) Arabidopsis
thaliana TAIR8 (arabidopsis_tair8) Arabidopsis thaliana TAIR9 (arabidopsis)
Archaeoglobus fulgidus DSM 4304 (archFulg1) Arcobacter butzleri RM4018 (16319)
Armadillo Dec. 2011 (Baylor/dasNov3) (dasNov3) Armadillo Jul. 2008
(Broad/dasNov2) (dasNov2) Armadillo May 2005 (Broad/dasNov1) (dasNov1)
Arthrobacter aurescens TC1 (12512) Arthrobacter sp. FB24 (arthFB24) Aster
yellows witches'-broom phytoplasma AYWB (13478) Atlantic cod May 2010 (Genofisk
GadMor_May2010/gadMor1) (gadMor1) Axolotl Dec. 2018 (ASM291563v2/ambMex2)
(ambMex2) Axolotl Feb. 2018 (ASM291563v1/ambMex1) (ambMex1) Azoarcus sp. BH72
(13217) Azoarcus sp. EbN1 (azoaSp_EBN1) Azorhizobium caulinodans ORS 571
(azorCaul2) Baboon Apr. 2017 (Panu_3.0/papAnu4) (papAnu4) Baboon Feb. 2013
(Baylor Panu_2.0/papAnu3) (papAnu3) Baboon Mar. 2012 (Baylor Panu_2.0/papAnu2)
(papAnu2) Baboon Nov. 2008 (Baylor Pham_1.0/papHam1) (papHam1) Bacillus
amyloliquefaciens FZB42 (13403) Bacillus anthracis str. 'Ames Ancestor' (10784)
Bacillus anthracis str. Ames (baciAnth_AMES) Bacillus anthracis str. Sterne
(10878) Bacillus cereus ATCC 10987 (74) Bacillus cereus ATCC 14579 (384)
Bacillus cereus E33L (12468) Bacillus cereus subsp. cytotoxis NVH 391-98 (13624)
Bacillus clausii KSM-K16 (13291) Bacillus halodurans C-125 (baciHalo) Bacillus
licheniformis ATCC 14580 (12388) Bacillus licheniformis ATCC 14580 (13082)
Bacillus pumilus SAFR-032 (20391) Bacillus subtilis subsp. subtilis str. 168
(baciSubt) Bacillus thuringiensis serovar konkukian str. 97-27 (10877) Bacillus
thuringiensis str. Al Hakam (18255) Bacillus weihenstephanensis KBAB4 (13623)
Bacteroides fragilis NCTC 9343 (46) Bacteroides fragilis YCH46 (13067)
Bacteroides thetaiotaomicron VPI-5482 (bactThet_VPI_5482) Bacteroides vulgatus
ATCC 8482 (13378) Bactrian camel Dec 2011 (CB1/camFer1) (camFer1) Barber pole
worm Dec. 2009 (WormBase WS210/haeCon1) (haeCon1) Barber pole worm Jul. 2013
(WormBase WS239/haeCon2) (haeCon2) Bartonella bacilliformis KC583 (16249)
Bartonella henselae str. Houston-1 (bartHens_HOUSTON_1) Bartonella quintana str.
Toulouse (44) Bartonella tribocorum CIP 105476 (28109) Baumannia cicadellinicola
str. Hc (Homalodisca coagulata) (baumCica_HOMALODISCA) Bdellovibrio
bacteriovorus HD100 (bdelBact) Beaver Feb. 2017 (C.can genome v1.0/casCan1)
(casCan1) Bicolor damselfish May 2014 (Stegastes_partitus-1.0.2/stePar1)
(stePar1) Bifidobacterium adolescentis ATCC 15703 (16321) Bifidobacterium longum
NCC2705 (bifiLong) Big brown bat Jul 2012 (EptFus1.0/eptFus1) (eptFus1) Bison
Oct. 2014 (Bison_UMD1.0/bisBis1) (bisBis1) Black flying-fox Aug 2012
(ASM32557v1/pteAle1) (pteAle1) Black lemur Aug. 2015
(Emacaco_refEf_BWA_oneround/eulMac1) (eulMac1) Black rockcod Jul 2014
(NC01/notCor1) (notCor1) Black snub-nosed monkey Aug. 2016 (ASM169854v1/rhiBie1)
(rhiBie1) Bonobo Aug. 2015 (MPI-EVA panpan1.1/panPan2) (panPan2) Bonobo May 2012
(Max-Planck/panPan1) (panPan1) Bordetella bronchiseptica RB50 (bordBron)
Bordetella parapertussis 12822 (25) Bordetella pertussis Tohama I (26)
Bordetella petrii DSM 12804 (28135) Boreoeutherian Apr. 24. 2006 (UCSC
Recon/borEut13) (borEut13) Boreoeutherian Nov. 19. 2005 (UCSC Recon/canHg12)
(canHg12) Borrelia afzelii PKo (17057) Borrelia burgdorferi B31 (borrBurg)
Borrelia garinii PBi (12554) Bradyrhizobium japonicum USDA 110 (bradJapo)
Bradyrhizobium sp. BTAi1 (16137) Bradyrhizobium sp. ORS278 (19575) Brandt's
myotis (bat) 28 Jun 2013 (ASM41265v1/myoBra1) (myoBra1) Brazilian guinea pig
Jan. 2014 (CavAp1.0/cavApe1) (cavApe1) Brown kiwi Jun. 2015 (MPI-EVA
AptMant0/aptMan1) (aptMan1) Brucella abortus biovar 1 str. 9-941 (9619) Brucella
canis ATCC 23365 (20243) Brucella melitensis 16M (brucMeli) Brucella melitensis
biovar Abortus 2308 (16203) Brucella ovis ATCC 25840 (12514) Brucella suis 1330
(320) Brucella suis ATCC 23445 (20371) Brush-tailed rat Apr 2012
(OctDeg1.0/octDeg1) (octDeg1) Buchnera aphidicola str. APS (Acyrthosiphon pisum)
(buchSp) Buchnera aphidicola str. Bp (Baizongia pistaciae) (256) Buchnera
aphidicola str. Cc (Cinara cedri) (16372) Buchnera aphidicola str. Sg
(Schizaphis graminum) (312) Budgerigar Sep. 2011 (WUSTL v6.3/melUnd1) (melUnd1)
Bundibugyo ebolavirus Aug. 2014 (NC_014373.1/bunEbo1) (bunEbo1) Burkholderia
ambifaria AMMD (burkCepa_AMMD) Burkholderia cenocepacia AU 1054
(burkCeno_AU_1054) Burkholderia cenocepacia HI2424 (burkCeno_HI2424)
Burkholderia cenocepacia MC0-3 (17929) Burkholderia mallei ATCC 23344
(burkMall_ATCC23344) Burkholderia mallei NCTC 10229 (13943) Burkholderia mallei
NCTC 10247 (13946) Burkholderia mallei SAVP1 (13947) Burkholderia multivorans
ATCC 17616 (17407) Burkholderia pseudomallei 1106a (burkPseu_1106A) Burkholderia
pseudomallei 1710b (13954) Burkholderia pseudomallei 668 (13953) Burkholderia
pseudomallei K96243 (178) Burkholderia sp. 383 (burk383) Burkholderia
thailandensis E264 (burkThai_E264) Burkholderia vietnamiensis G4 (burkViet_G4)
Burkholderia xenovorans LB400 (burkXeno_LB400) Burton's mouthbreeder Oct 2011
(AstBur1.0/hapBur1) (hapBur1) Bushbaby Dec. 2006 (Broad/otoGar1) (otoGar1)
Bushbaby Mar. 2011 (Broad/otoGar3) (otoGar3) C. angaria Apr. 2012
(WS232/ps1010rel8/caeAng2) (caeAng2) C. angaria Oct. 2010 (WS225/caeAng1)
(caeAng1) C. brenneri Feb. 2008 (WUGSC 6.0.1/caePb2) (caePb2) C. brenneri Jan.
2007 (WUGSC 4.0/caePb1) (caePb1) C. brenneri Nov. 2010 (C. brenneri
6.0.1b/caePb3) (caePb3) C. briggsae Apr. 2011 (WS225/cb4) (cb4) C. briggsae Aug
2005 (WUGSC prelim/cb2) (cb2) C. briggsae Jan. 2007 (WUGSC 1.0/cb3) (cb3) C.
briggsae July 2002 (WormBase cb25.agp8/cb1) (cb1) C. elegans Aug. 2007
(WS180/ce5) (ce5) C. elegans Feb 2009 (WS200/ce7) (ce7) C. elegans Feb. 2013
(WBcel235/ce11) (ce11) C. elegans Jan 2010 (WS210/ce9) (ce9) C. elegans Jan.
2007 (WS170/ce4) (ce4) C. elegans Jun 2009 (WS204/ce8) (ce8) C. elegans Mar.
2004 (WS120/ce2) (ce2) C. elegans March 2005 (WS140/ce3) (ce3) C. elegans May
2008 (WS190/ce6) (ce6) C. elegans Oct. 2010 (WS220/ce10) (ce10) C. intestinalis
Apr. 2011 (Kyoto KH/ci3) (ci3) C. intestinalis Dec. 2002 (JGI 1.0/ci1) (ci1) C.
intestinalis Mar. 2005 (JGI 2.1/ci2) (ci2) C. japonica Sep. 2010 (WUGSC
7.0.1/caeJap3) (caeJap3) C. japonica Aug. 2010 (WUSTL 7.0.1/caeJap4) (caeJap4)
C. japonica Jan. 2009 (WUGSC 4.0.1/caeJap2) (caeJap2) C. japonica Mar. 2008
(WUGSC 3.0.2/caeJap1) (caeJap1) C. remanei Jul. 2007 (WS220/caeRem4) (caeRem4)
C. remanei Mar. 2006 (WUGSC 1.0/caeRem2) (caeRem2) C. remanei March 2005 (WUGSC
prelim/caeRem1) (caeRem1) C. remanei May 2007 (WUGSC 15.0.1/caeRem3) (caeRem3)
C. savignyi Apr. 2003 (Broad/cioSav1) (cioSav1) C. savignyi July 2005 (Sidow Lab
2.0/cioSav2) (cioSav2) C. sp. 5 ju800 Jan. 2012
(WS230/Caenorhabditis_sp_5-JU800-1.0/caeSp51) (caeSp51) C. sp. 7 ju1286 Nov.
2010 (WUSTL 4.0.1/caeSp71) (caeSp71) C. sp. 9 ju1422 Nov. 2010 (WUSTL
3.0.1/caeSp91) (caeSp91) C. tropicalis Nov. 2010 (WS226/WUSTL 3.0.1/caeSp111)
(caeSp111) Cactus Nov. 2010 (CactusV3/cacTus3) (cacTus3) Cactus Oct. 2010
(Ngan10.1/cacTus2) (cacTus2) Cactus Sep. 2010 (CactusV1/cacTus1) (cacTus1)
Caldicellulosiruptor saccharolyticus DSM 8903 (caldSacc_DSM8903) Caldivirga
maquilingensis IC-167 (caldMaqu1) Campylobacter concisus 13826 (17159)
Campylobacter curvus 525.92 (17161) Campylobacter fetus subsp. fetus 82-40
(campFetu_82_40) Campylobacter hominis ATCC BAA-381 (20083) Campylobacter jejuni
RM1221 (campJeju_RM1221) Campylobacter jejuni subsp. doylei 269.97 (17163)
Campylobacter jejuni subsp. jejuni 81-176 (campJeju_81_176) Campylobacter jejuni
subsp. jejuni 81116 (17953) Campylobacter jejuni subsp. jejuni NCTC 11168
(campJeju) Candidatus Blochmannia floridanus (blocFlor) Candidatus Blochmannia
pennsylvanicus str. BPEN (13875) Candidatus Carsonella ruddii PV
(candCars_RUDDII) Candidatus Desulforudis audaxviator MP104C (21047) Candidatus
Korarchaeum cryptofilum OPF8 (16525) Candidatus Methanoregula boonei 6A8
(methBoon1) Candidatus Pelagibacter ubique HTCC1062 (candPela_UBIQUE_HTCC1)
Candidatus Protochlamydia amoebophila UWE25 (paraSp_UWE25) Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica) (16841) Candidatus Sulcia muelleri
GWSS (19617) Candidatus Vesicomyosocius okutanii HA (18267) Cape elephant shrew
Aug 2012 (EleEdw1.0/eleEdw1) (eleEdw1) Cape golden mole Aug 2012
(ChrAsi1.0/chrAsi1) (chrAsi1) Carboxydothermus hydrogenoformans Z-2901
(carbHydr_Z_2901) Cat Dec. 2008 (NHGRI/GTB V17e/felCat4) (felCat4) Cat Mar. 2006
(Broad/felCat3) (felCat3) Cat Nov. 2014 (ICGSC Felis_catus_8.0/felCat8)
(felCat8) Cat Nov. 2017 (Felis_catus_9.0/felCat9) (felCat9) Cat Sep. 2011 (ICGSC
Felis_catus 6.2/felCat5) (felCat5) Catarrhini June 13. 2006 (UCSC Recon/catArr1)
(catArr1) Caulobacter crescentus CB15 (caulCres) Caulobacter sp. K31 (16306)
CentromereY 2013 GrCh38 (centromeres1) Chicken Dec 2015
(Gallus_gallus-5.0/galGal5) (galGal5) Chicken Feb. 2004 (WUGSC 1.0/galGal2)
(galGal2) Chicken Mar. 2018 (GRCg6a/galGal6) (galGal6) Chicken May 2006 (WUGSC
2.1/galGal3) (galGal3) Chicken Nov. 2011 (ICGSC Gallus_gallus-4.0/galGal4)
(galGal4) Chimp Feb. 2011 (CSAC 2.1.4/panTro4) (panTro4) Chimp Jan. 2018
(Clint_PTRv2/panTro6) (panTro6) Chimp Mar. 2006 (CGSC 2.1/panTro2) (panTro2)
Chimp May 2016 (Pan_tro 3.0/panTro5) (panTro5) Chimp Nov. 2003 (CGSC
1.1/panTro1) (panTro1) Chimp Oct. 2010 (CGSC 2.1.3/panTro3) (panTro3) Chinchilla
May 2012 (ChiLan1.0/chiLan1) (chiLan1) Chinese hamster Aug. 2011 (CHO K1 cell
line/criGriChoV1) (criGriChoV1) Chinese hamster Jul. 2013
(C_griseus_v1.0/criGri1) (criGri1) Chinese hamster Jun. 2017
(CHOK1S_HZDv1/criGriChoV2) (criGriChoV2) Chinese pangolin Aug 2014
(M_pentadactyla-1.1.1/manPen1) (manPen1) Chinese softshell turtle Oct 2011
(PelSin_1.0/pelSin1) (pelSin1) Chinese tree shrew Jan 2013 (TupChi_1.0/tupChi1)
(tupChi1) Chlamydia muridarum Nigg (229) Chlamydia trachomatis 434/Bu (28583)
Chlamydia trachomatis A/HAR-13 (13885) Chlamydia trachomatis D/UW-3/CX
(chlaTrac) Chlamydia trachomatis L2b/UCH-1/proctitis (28585) Chlamydophila
abortus S26/3 (355) Chlamydophila caviae GPIC (228) Chlamydophila felis Fe/C-56
(370) Chlamydophila pneumoniae AR39 (247) Chlamydophila pneumoniae CWL029
(chlaPneu_CWL029) Chlamydophila pneumoniae J138 (257) Chlamydophila pneumoniae
TW-183 (420) Chlorobium chlorochromatii CaD3 (chloChlo_CAD3) Chlorobium
phaeobacteroides DSM 266 (12609) Chlorobium tepidum TLS (chloTepi_TLS)
Chloroflexus aurantiacus J-10-fl (59) Chromobacterium violaceum ATCC 12472
(chroViol) Chromohalobacter salexigens DSM 3043 (chroSale_DSM3043) Citrobacter
koseri ATCC BAA-895 (12716) Clavibacter michiganensis subsp. michiganensis NCPPB
382 (clavMich_NCPPB_382) Clavibacter michiganensis subsp. sepedonicus (184)
Clostridium acetobutylicum ATCC 824 (77) Clostridium beijerinckii NCIMB 8052
(12637) Clostridium botulinum A str. ATCC 19397 (19517) Clostridium botulinum A
str. ATCC 3502 (193) Clostridium botulinum A str. Hall (19521) Clostridium
botulinum A3 str. Loch Maree (28507) Clostridium botulinum B1 str. Okra (28505)
Clostridium botulinum F str. Langeland (19519) Clostridium difficile 630 (78)
Clostridium kluyveri DSM 555 (19065) Clostridium novyi NT (16820) Clostridium
perfringens ATCC 13124 (304) Clostridium perfringens SM101 (12521) Clostridium
perfringens str. 13 (79) Clostridium phytofermentans ISDg (16184) Clostridium
tetani E88 (81) Clostridium thermocellum ATCC 27405 (314) Coelacanth Aug. 2011
(Broad/latCha1) (latCha1) Collared flycatcher Jun 2013 (FicAlb1.5/ficAlb2)
(ficAlb2) Collared flycatcher Jun. 2013 (FicAlb1.5/ficAlb1) (ficAlb1) Colwellia
psychrerythraea 34H (colwPsyc_34H) Coquerel's sifaka Mar. 2015
(Pcoq_1.0/proCoq1) (proCoq1) Corynebacterium diphtheriae NCTC 13129 (87)
Corynebacterium efficiens YS-314 (coryEffi_YS_314) Corynebacterium glutamicum
ATCC 13032 (13760) Corynebacterium glutamicum ATCC 13032 (307) Corynebacterium
glutamicum R (19193) Corynebacterium jeikeium K411 (13967) Cow Apr. 2009 (Baylor
Btau_4.2/bosTau5) (bosTau5) Cow Apr. 2018 (ARS-UCD1.2/bosTau9) (bosTau9) Cow
Aug. 2006 (Baylor 3.1/bosTau3) (bosTau3) Cow Aug. 2009 (UMD3.1) (bosTauMd3) Cow
Jun. 2014 (Bos_taurus_UMD_3.1.1/bosTau8) (bosTau8) Cow Mar. 2005 (Baylor
2.0/bosTau2) (bosTau2) Cow Nov. 2009 (Bos_taurus_UMD_3.1/bosTau6) (bosTau6) Cow
Oct. 2007 (Baylor 4.0/bosTau4) (bosTau4) Cow Oct. 2011 (Baylor
Btau_4.6.1/bosTau7) (bosTau7) Coxiella burnetii Dugway 5J108-111 (16721)
Coxiella burnetii RSA 331 (16791) Coxiella burnetii RSA 493 (coxiBurn)
Crab-eating macaque Jun. 2013 (Macaca_fascicularis_5.0/macFas5) (macFas5)
Cytophaga hutchinsonii ATCC 33406 (cytoHutc_ATCC33406) D. albomicans 21 May 2012
(DroAlb_1.0/droAlb1) (droAlb1) D. ananassae Aug. 2005 (Agencourt prelim/droAna2)
(droAna2) D. ananassae Feb. 2006 (droAna3) D. ananassae July 2004 (TIGR/droAna1)
(droAna1) D. biarmipes 04 Mar 2013 (Dbia_2.0/droBia2) (droBia2) D. bipectinata
04 Mar 2013 (Dbip_2.0/droBip2) (droBip2) D. elegans 04 Mar 2013
(Dele_2.0/droEle2) (droEle2) D. erecta Aug. 2005 (Agencourt prelim/droEre1)
(droEre1) D. erecta Feb. 2006 (droEre2) D. eugracilis 04 Mar 2013
(Deug_2.0/droEug2) (droEug2) D. ficusphila 04 Mar 2013 (Dfic_2.0/droFic2)
(droFic2) D. grimshawi Aug. 2005 (Agencourt prelim/droGri1) (droGri1) D.
grimshawi Feb. 2006 (droGri2) D. kikkawai 04 Mar 2013 (Dkik_2.0/droKik2)
(droKik2) D. melanogaster Apr. 2004 (BDGP R4/dm2) (dm2) D. melanogaster Apr.
2006 (BDGP R5/dm3) (dm3) D. melanogaster Aug. 2014 (BDGP Release 6 + ISO1
MT/dm6) (dm6) D. melanogaster Jan. 2003 (BDGP R3/dm1) (dm1) D. miranda 19 Apr
2013 (DroMir_2.2/droMir2) (droMir2) D. mojavensis Aug. 2004 (Agencourt
prelim/droMoj1) (droMoj1) D. mojavensis Aug. 2005 (Agencourt prelim/droMoj2)
(droMoj2) D. mojavensis Feb. 2006 (droMoj3) D. persimilis Oct. 2005
(Broad/droPer1) (droPer1) D. pseudoobscura (dp4) (dp4) D. pseudoobscura 11 Apr
2013 (Dpse_3.0/droPse3) (droPse3) D. pseudoobscura Aug. 2003 (Baylor
freeze1/dp2) (dp2) D. pseudoobscura Nov. 2004 (FlyBase 1.03/dp3) (dp3) D.
rhopaloa 22 Feb 2013 (Drho_2.0/droRho2) (droRho2) D. sechellia Oct. 2005
(Broad/droSec1) (droSec1) D. simulans Apr. 2005 (WUGSC mosaic 1.0/droSim1)
(droSim1) D. simulans Sep. 2014 (ASM75419v2/droSim2) (droSim2) D. suzukii 30 Sep
2013 (Dsuzukii.v01/droSuz1) (droSuz1) D. takahashii 04 Mar 2013
(Dtak_2.0/droTak2) (droTak2) D. virilis Aug. 2005 (Agencourt prelim/droVir2)
(droVir2) D. virilis Feb. 2006 (Agencourt CAF1/droVir3) (droVir3) D. virilis
July 2004 (Agencourt prelim/droVir1) (droVir1) D. willistoni 03 Aug 2006
(dwil_caf1/droWil2) (droWil2) D. willistoni Feb. 2006 (droWil1) D. yakuba 27 Jun
2006 (dyak_caf1/droYak3) (droYak3) D. yakuba Apr. 2004 (WUGSC 1.0/droYak1)
(droYak1) D. yakuba Nov. 2005 (WUGSC 7.1/droYak2) (droYak2) Damara mole rat Sep.
2014 (DMR_v1.0/fukDam1) (fukDam1) David's myotis (bat) Aug 2012
(ASM32734v1/myoDav1) (myoDav1) Dechloromonas aromatica RCB (dechArom_RCB) Deer
Tick (Ixodes scapularis) (IscaW1) Dehalococcoides ethenogenes 195 (dehaEthe_195)
Dehalococcoides sp. BAV1 (15770) Dehalococcoides sp. CBDB1 (15604) Deinococcus
geothermalis DSM 11300 (deinGeot_DSM11300) Deinococcus radiodurans R1 (deinRadi)
Delftia acidovorans SPH-1 (17413) Desulfitobacterium hafniense Y51
(desuHafn_Y51) Desulfococcus oleovorans Hxd3 (18007) Desulfotalea psychrophila
LSv54 (desuPsyc_LSV54) Desulfotomaculum reducens MI-1 (desuRedu_MI_1)
Desulfovibrio desulfuricans G20 (329) Desulfovibrio vulgaris subsp. vulgaris DP4
(17227) Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
(desuVulg_HILDENBOROUG) Dichelobacter nodosus VCS1703A (dichNodo_VCS1703A)
Dinoroseobacter shibae DFL 12 (17417) Dog July 2004 (Broad/canFam1) (canFam1)
Dog May 2003 (TIGR Poodle/canFamPoodle1) (canFamPoodle1) Dog May 2005
(Broad/canFam2) (canFam2) Dog Sep. 2011 (Broad CanFam3.1/canFam3) (canFam3) Dog
heartworm Sep. 2013 (WS240/D. immitis v2.2/dirImm1) (dirImm1) Dolphin Feb. 2008
(Broad/turTru1) (turTru1) Dolphin Oct. 2011 (Baylor Ttru_1.4/turTru2) (turTru2)
Domestic goat May 2012 (CHIR_1.0/capHir1) (capHir1) Drill Mar. 2015
(Mleu.le_1.0/manLeu1) (manLeu1) Eastern happy Jan. 2018 (fAstCal1.1/astCal1)
(astCal1) Ebola virus 49 sequences: 5 Ebola, 2 Marburg strains (eboVir2) Ebola
virus Aug. 2014 (46 strains eboVir1/eboVir1) (eboVir1) Ebola virus Sierra Leone
2014 (G3683/KM034562.1/eboVir3) (eboVir3) Ecoref Feb. 2013 (ecoRef3/ecoRef3)
(ecoRef3) Ecoref Feb. 2013 (ecoRef4/ecoRef4) (ecoRef4) Ecoref Jan. 2013
(ecoRef1/ecoRef1) (ecoRef1) Ecoref Jan. 2013 (ecoRef2/ecoRef2) (ecoRef2)
Egyptian rousette Mar 2016 (Raegyp2.0/rouAeg1) (rouAeg1) Ehrlichia canis str.
Jake (10694) Ehrlichia chaffeensis str. Arkansas (325) Ehrlichia ruminantium
str. Gardel (13356) Ehrlichia ruminantium str. Welgevonden (13355) Ehrlichia
ruminantium str. Welgevonden (ehrlRumi_WELGEVONDEN) Elephant Jul. 2008
(Broad/loxAfr2) (loxAfr2) Elephant Jul. 2009 (Broad/loxAfr3) (loxAfr3) Elephant
May 2005 (Broad/loxAfr1) (loxAfr1) Elephant shark Dec. 2013
(Callorhinchus_milii-6.1.3/calMil1) (calMil1) Enterobacter sakazakii ATCC
BAA-894 (12720) Enterobacter sp. 638 (ente638) Enterococcus faecalis V583
(enteFaec_V583) Erythrobacter litoralis HTCC2594 (erytLito_HTCC2594) Escherichia
coli 536 (16235) Escherichia coli APEC O1 (eschColi_APEC_O1) Escherichia coli C
str. ATCC 8739 (18083) Escherichia coli CFT073 (eschColi_CFT073) Escherichia
coli DH10B (20079) Escherichia coli E24377A (13960) Escherichia coli EC4115
(eschColi_EC4115) Escherichia coli HS (13959) Escherichia coli K12
(eschColi_K12) Escherichia coli O157:H7 EDL933 (259) Escherichia coli O157:H7
str. Sakai (eschColi_O157H7) Escherichia coli SECEC SMS-3-5 (19469) Escherichia
coli TW14359 (eschColi_TW14359) Escherichia coli UTI89 (16259) Escherichia coli
W3110 (16351) Euarchontoglires Apr. 24. 2006 (UCSC Recon/euaGli13) (euaGli13)
European sea bass Apr 2014 (seabass_V1.0/dicLab1) (dicLab1) Eutheria Apr. 24.
2006 (UCSC Recon/eutHer13) (eutHer13) Evosim Feb. 2013 (evoSim1/evoSim1)
(evoSim1) Eye worm Jul. 2012 (WS235/L_loa_Cameroon_isolate/loaLoa1) (loaLoa1)
Ferret Apr. 2011 (MusPutFur1.0/musFur1) (musFur1) Fervidobacterium nodosum
Rt17-B1 (16719) Filarial worm May. 2014 (WS244/B_malayi-3.1/bruMal2) (bruMal2)
Filarial worm Sep. 2007 (TIGR 1.0/bruMal1) (bruMal1) Finegoldia magna ATCC 29328
(18981) Fission Yeast (S. pombe) (Schizosaccharomyces_pombe_1.1) Flag rockfish
22 Oct-2013 (SRub1.0/sebRub1) (sebRub1) Flavobacterium johnsoniae UW101
(flavJohn_UW101) Flavobacterium psychrophilum JIP02/86 (19979) Francisella
philomiragia subsp. philomiragia ATCC 25017 (27853) Francisella tularensis
subsp. holarctica (16421) Francisella tularensis subsp. holarctica FTA (20197)
Francisella tularensis subsp. holarctica OSU18 (17265) Francisella tularensis
subsp. novicida U112 (16088) Francisella tularensis subsp. tularensis FSC198
(17375) Francisella tularensis subsp. tularensis SCHU S4 (franTula_TULARENSIS)
Francisella tularensis subsp. tularensis WY96-3418 (18459) Frankia alni ACN14a
(17403) Frankia sp. CcI3 (franCcI3) Frankia sp. EAN1pec (13915) Fugu Aug. 2002
(JGI 3.0/fr1) (fr1) Fugu Oct. 2004 (JGI 4.0/fr2) (fr2) Fugu Oct. 2011
(FUGU5/fr3) (fr3) Fusobacterium nucleatum subsp. nucleatum ATCC 25586 (fusoNucl)
GRCh37.p10 Sep. 2012 (GRCh37.p10/hg19Patch10) (hg19Patch10) GRCh37.p13 Jun. 2013
(hg19Patch13) GRCh37.p2 Aug. 2009 (GRCh37.p2/hg19Patch2) (hg19Patch2) GRCh37.p5
Jun. 2011 (GRCh37.p5/hg19Patch5) (hg19Patch5) GRCh37.p9 Jul. 2012
(GRCh37.p9/hg19Patch9) (hg19Patch9) GRCh38.p11 Jun. 2017 (hg38Patch11) GRCh38.p2
Dec. 2014 (hg38Patch2) GRCh38.p3 Apr. 2015 (hg38Patch3) GRCh38.p5 Sep. 2015
(hg38Patch5) GRCh38.p6 Dec. 2015 (hg38Patch6) GRCh38.p7 Mar. 2016 (hg38Patch7)
GRCh38.p9 Sep. 2016 (hg38Patch9) GRCm38.p1 Aug. 2012 (GRCm38.p1/mm10Patch1)
(mm10Patch1) GRCm38.p4 Mar. 2015 (mm10Patch4) Garter snake Jun. 2015
(Thamnophis_sirtalis-6.0/thaSir1) (thaSir1) Geobacillus kaustophilus HTA426
(geobKaus_HTA426) Geobacillus thermodenitrificans NG80-2 (geobTher_NG80_2)
Geobacter metallireducens GS-15 (geobMeta_GS15) Geobacter sulfurreducens PCA
(geobSulf) Geobacter uraniireducens Rf4 (geobUran_RF4) Gharial APR 2009
(preliminary/gavGan0) (gavGan0) Gibbon Jan. 2010 (GGSC Nleu1.0/nomLeu1)
(nomLeu1) Gibbon Jun. 2011 (GGSC Nleu1.1/nomLeu2) (nomLeu2) Gibbon Oct. 2012
(GGSC Nleu3.0/nomLeu3) (nomLeu3) Glires Apr. 24. 2006 (UCSC Recon/gliRes13)
(gliRes13) Gloeobacter violaceus PCC 7421 (gloeViol) Gluconacetobacter
diazotrophicus PAl 5 (377) Gluconobacter oxydans 621H (glucOxyd_621H) Golden
eagle May 2014 (AquilaChrysaetos1/aquChr1) (aquChr1) Golden eagle Oct. 2014
(aquChr-1.0.2/aquChr2) (aquChr2) Golden hamster Mar 2013 (MesAur1.0/mesAur1)
(mesAur1) Golden snub-nosed monkey Oct. 2014 (Rrox_v1/rhiRox1) (rhiRox1)
Golden-collared manakin May 2014 (ASM69201v1/manVit1) (manVit1) Gorilla Aug.
2009 (Sanger 4/gorGor2) (gorGor2) Gorilla Dec 2014 (gorGor4.1/gorGor4) (gorGor4)
Gorilla Mar. 2016 (GSMRT3/gorGor5) (gorGor5) Gorilla May 2011
(gorGor3.1/gorGor3) (gorGor3) Gorilla Oct. 2008 (Sanger 0.1/gorGor1) (gorGor1)
Gramella forsetii KT0803 (gramFors_KT0803) Granulibacter bethesdensis CGDNIH1
(granBeth_CGDNIH1) Greater horseshoe bat Sep. 2013 (ASM46549v1/rhiFer1)
(rhiFer1) Green monkey Jun 2013 (Chlorocebus_sabeus 1.0/chlSab1) (chlSab1) Green
monkey Mar. 2014 (Chlorocebus_sabeus 1.1/chlSab2) (chlSab2) Green seaturtle Mar
2013 (CheMyd_1.0/cheMyd1) (cheMyd1) Guinea pig Feb. 2008 (Broad/cavPor3)
(cavPor3) Guppy Apr. 2014 (Guppy_female_1.0/poeRet1) (poeRet1) H.
bacteriophora/m31e Aug. 2011 (WS229/H. bacteriophora 7.0/hetBac1) (hetBac1)
Haemophilus ducreyi 35000HP (38) Haemophilus influenzae 86-028NP (11752)
Haemophilus influenzae PittEE (16400) Haemophilus influenzae PittGG (16401)
Haemophilus influenzae Rd KW20 (haemInfl_KW20) Haemophilus somnus 129PT
(haemSomn_129PT) Haemophilus somnus 2336 (388) Hahella chejuensis KCTC 2396
(haheChej_KCTC_2396) Haloarcula marismortui ATCC 43049 (halMar1) Halobacterium
salinarum R1 (106) Halobacterium sp. NRC-1 (haloHalo1) Haloquadratum walsbyi DSM
16790 (haloWals1) Halorhodospira halophila SL1 (haloHalo_SL1) Hawaiian monk seal
Jun. 2017 (ASM220157v1/neoSch1) (neoSch1) Hbv Apr. 1993 (ViralProj15428/hbv1)
(hbv1) Head Louse (Pediculus humanus) (PhumU1) Hedgehog June 2006
(Broad/eriEur1) (eriEur1) Hedgehog May 2012 (EriEur2.0/eriEur2) (eriEur2)
Helicobacter acinonychis str. Sheeba (heliAcin_SHEEBA) Helicobacter hepaticus
ATCC 51449 (heliHepa) Helicobacter pylori 26695 (heliPylo_26695) Helicobacter
pylori HPAG1 (heliPylo_HPAG1) Helicobacter pylori J99 (heliPylo_J99)
Heliobacterium modesticaldum Ice1 (13427) Herminiimonas arsenicoxydans
(hermArse) Herpetosiphon aurantiacus ATCC 23779 (16523) Hg19 lgg inversion Mar
2013 (1/hg19LggInv) (hg19LggInv) Hlaref Apr. 2012 (hlaRefV1/hlaRef1) (hlaRef1)
Hlaref Apr. 2012 (hlaRefV2/hlaRef2) (hlaRef2) Hlaref Apr. 2012
(hlaRefV3/hlaRef3) (hlaRef3) Hominidae Apr. 24. 2006 (UCSC Recon/homIni13)
(homIni13) Hominidae Oct. 1. 2006 (UCSC Recon/homIni14) (homIni14) Homo sapiens
(hg19 with mtDNA replaced with rCRS) (Homo_sapiens_nuHg19_mtrCRS) Homo sapiens
(hg19 with mtDNA replaced with rCRS, and containing pUC18 and phiX174)
(hg19_rCRS_pUC18_phiX174) Homo sapiens b37 (hg_g1k_v37) Homo sapiens
hydatidiform mole assembly chm1 June 2013 (1/CHM1) (CHM1) Honeybee (Apis
mellifera): apiMel3 (apiMel3) Horse Jan. 2007 (Broad/equCab1) (equCab1) Horse
Jan. 2018 (EquCab3.0/equCab3) (equCab3) Horse Sep. 2007 (Broad/equCab2)
(equCab2) Hpv Aug. 2002 (ViralProj15424/hpv1) (hpv1) Human ANGIE TEST Dec. 2013
(GRCh38/grcHhh38) (grcHhh38) Human ANGIE TEST Dec. 2017 (GRCh38.p12/grcH38P12)
(grcH38P12) Human ANGIE TEST Jun. 2017 (GRCh38.p11/grcH38P11) (grcH38P11) Human
Apr. 2003 (NCBI33/hg15) (hg15) Human CHM13 2.0 (T2T Consortium) Jan. 2022 Human
Dec. 2013 (GRCh38/hg38) (hg38) Human Feb. 2009 (GRCh37/hg19) (hg19) Human July
2003 (NCBI34/hg16) (hg16) Human Mar. 2006 (NCBI36/hg18) (hg18) Human May 2004
(NCBI35/hg17) (hg17) Human herpesvirus 1 (15217) Human repeats Nov. 2012
(1/repeats2) (repeats2) Hydra magnipapillata str. 105 (Hydra_JCVI) Hyperthermus
butylicus DSM 5456 (hypeButy1) Hyphomonas neptunium ATCC 15444
(hyphNept_ATCC15444) Idiomarina loihiensis L2TR (idioLoih_L2TR) Ignicoccus
hospitalis KIN4/I (13914) Indian false vampire Sep. 2013 (ASM46534v1/megLyr1)
(megLyr1) J. Craig Venter Sep. 2007 (HuRef/venter1) (venter1) Jannaschia sp.
CCS1 (jannCCS1) Janthinobacterium sp. Marseille (16549) Japanese quail 26
Jul-2013 (Coja_1.0/cotJap1) (cotJap1) Japanese quail Mar. 2016 (Coturnix
japonica 2.0/cotJap2) (cotJap2) Kangaroo rat Dec. 2014 (Dord_2.0/dipOrd2)
(dipOrd2) Kangaroo rat Jul. 2008 (Broad/dipOrd1) (dipOrd1) Killdeer Jun 2014
(ASM70802v1/chaVoc1) (chaVoc1) Killer whale Jan. 2013 (Oorc_1.1/orcOrc1)
(orcOrc1) Kineococcus radiotolerans SRS30216 (10689) Kirref Apr. 2011
(kirRef/kirRef) (kirRef) Kirrefv2 Apr. 2011 (kirRefV2/kirRefV2) (kirRefV2)
Kirrefv3 Apr. 2011 (kirRefV3/kirRefV3) (kirRefV3) Kirrefv4 Apr. 2011
(kirRefV4/kirRefV4) (kirRefV4) Kirrefv5 Apr. 2011 (kirRefV5/kirRefV5) (kirRefV5)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (31) Koala (Phascolarctos
cinereus): phaCin_unsw_v4.1 (GCF_002099425.1) Korean Man (Homo_sapiens_AK1)
Lactobacillus acidophilus NCFM (82) Lactobacillus brevis ATCC 367 (404)
Lactobacillus casei ATCC 334 (402) Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842 (16871) Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
(403) Lactobacillus gasseri ATCC 33323 (84) Lactobacillus helveticus DPC 4571
(17811) Lactobacillus johnsonii NCC 533 (9638) Lactobacillus plantarum WCFS1
(lactPlan) Lactobacillus reuteri F275 (15766) Lactobacillus sakei subsp. sakei
23K (13435) Lactobacillus salivarius UCC118 (lactSali_UCC118) Lactococcus lactis
subsp. cremoris MG1363 (18797) Lactococcus lactis subsp. cremoris SK11 (401)
Lactococcus lactis subsp. lactis Il1403 (lactLact) Lamprey Dec. 2017
(Pmar_germline 1.0/petMar3) (petMar3) Lamprey Mar. 2007 (WUGSC 3.0/petMar1)
(petMar1) Lamprey Sep. 2010 (WUGSC 7.0/petMar2) (petMar2) Lancelet Apr. 2008
(JGI v2.0/braFlo2) (braFlo2) Lancelet Mar. 2006 (JGI 1.0/braFlo1) (braFlo1)
Laurasiatheria Apr. 24. 2006 (UCSC Recon/lauRas13) (lauRas13) Lawsonia
intracellularis PHE/MN1-00 (lawsIntr_PHE_MN1_00) Legionella pneumophila str.
Corby (17491) Legionella pneumophila str. Lens (13126) Legionella pneumophila
str. Paris (13127) Legionella pneumophila subsp. pneumophila str. Philadelphia 1
(legiPneu_PHILADELPHIA) Leifsonia xyli subsp. xyli str. CTCB07
(leifXyli_XYLI_CTCB0) Leishmania major 2005 (lMaj5) Leptospira borgpetersenii
serovar Hardjo-bovis JB197 (16148) Leptospira borgpetersenii serovar
Hardjo-bovis L550 (16146) Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130 (10687) Leptospira interrogans serovar Lai str. 56601 (leptInte)
Leptothrix cholodnii SP-6 (20039) Lesser Egyptian jerboa May 2012
(JacJac1.0/jacJac1) (jacJac1) Leuconostoc citreum KM20 (16062) Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293 (leucMese_ATCC8293) Limpet Jul.
2013 (lotGig0/lotGig0) (lotGig0) Listeria innocua Clip11262 (listInno) Listeria
monocytogenes EGD-e (276) Listeria monocytogenes str. 4b F2365 (85) Listeria
welshimeri serovar 6b str. SLCC5334 (13443) Lizard Feb. 2007 (Broad/anoCar1)
(anoCar1) Lizard May 2010 (Broad AnoCar2.0/anoCar2) (anoCar2) Lysinibacillus
sphaericus C3-41 (19619) M. domestica 22 Apr 2013
(Musca_domestica-2.0.2/musDom2) (musDom2) M. hapla Sep. 2008 (M. hapla VW9
WS210/melHap1) (melHap1) M. incognita Feb. 2008 (M. incognita WS210/melInc1)
(melInc1) M. incognita Feb. 2008 (M. incognita WS245/PRJEA28837/melInc2)
(melInc2) MMTV Nov. 2009 (MMTV/mmtv) (mmtv) Ma's night monkey Jun. 2017
(Anan_2.0/aotNan1) (aotNan1) Magnetococcus sp. MC-1 (magnMC1) Magnetospirillum
magneticum AMB-1 (magnMagn_AMB_1) Maize (Zea mays) (Zea_mays_B73_RefGen_v2)
Malayan flying lemur Jun. 2014 (G_variegatus-3.0.2/galVar1) (galVar1) Mallard
duck Apr 2013 (BGI_duck_1.0/anaPla1) (anaPla1) Manatee Oct. 2011 (Broad
v1.0/triMan1) (triMan1) Mannheimia succiniciproducens MBEL55E (mannSucc_MBEL55E)
Marburg virus Sep. 2014 (NC_024781.1/marVir1) (marVir1) Maricaulis maris MCS10
(mariMari_MCS10) Marinobacter aquaeolei VT8 (mariAqua_VT8) Marinomonas sp. MWYL1
(17445) Marmoset June 2007 (WUGSC 2.0.2/calJac1) (calJac1) Marmoset March 2009
(WUGSC 3.2/calJac3) (calJac3) Medaka Apr. 2006 (NIG/UT MEDAKA1/oryLat1)
(oryLat1) Medaka Oct. 2005 (NIG/UT MEDAKA1/oryLat2) (oryLat2) Medium ground
finch Apr. 2012 (GeoFor_1.0/geoFor1) (geoFor1) Megabat Jul. 2008 (Broad/pteVam1)
(pteVam1) Mesoplasma florum L1 (mesoFlor_L1) Mesorhizobium loti MAFF303099
(mesoLoti) Mesorhizobium sp. BNC1 (10690) Metallosphaera sedula DSM 5348
(metaSedu) Methanobrevibacter smithii ATCC 35061 (methSmit1) Methanocaldococcus
jannaschii DSM 2661 (methJann1) Methanococcoides burtonii DSM 6242 (methBurt2)
Methanococcus aeolicus Nankai-3 (methAeol1) Methanococcus maripaludis C5
(methMari_C5_1) Methanococcus maripaludis C6 (19639) Methanococcus maripaludis
C7 (methMari_C7) Methanococcus maripaludis S2 (metMar1) Methanococcus vannielii
SB (methVann1) Methanocorpusculum labreanum Z (methLabrZ_1) Methanoculleus
marisnigri JR1 (mculMari1) Methanopyrus kandleri AV19 (methKand1) Methanosaeta
thermophila PT (methTherPT1) Methanosarcina acetivorans C2A (metAce1)
Methanosarcina barkeri str. Fusaro (methBark1) Methanosarcina mazei Go1
(methMaze1) Methanosphaera stadtmanae DSM 3091 (methStad1) Methanospirillum
hungatei JF-1 (methHung1) Methanothermobacter thermautotrophicus str. Delta H
(methTher1) Methylibium petroleiphilum PM1 (methPetr_PM1) Methylobacillus
flagellatus KT (methFlag_KT) Methylobacterium extorquens PA1 (18637)
Methylobacterium radiotolerans JCM 2831 (18817) Methylobacterium sp. 4-46
(18809) Methylococcus capsulatus str. Bath (methCaps_BATH) Mexican tetra
(cavefish) Apr 2013 (Astyanax_mexicanus-1.0.2/astMex1) (astMex1) Mhcref Apr.
2011 (mhcRefnoNsV2/mhcRefnoNs2) (mhcRefnoNs2) Mhcref Jan. 2011 (mhcRefV1/mhcRef)
(mhcRef) Mhcref July 2011 (mhcRefnoNsV10/mhcRefnoNs10) (mhcRefnoNs10) Mhcref
July 2011 (mhcRefnoNsV11/mhcRefnoNs11) (mhcRefnoNs11) Mhcref July 2011
(mhcRefnoNsV12/mhcRefnoNs12) (mhcRefnoNs12) Mhcref July 2011
(mhcRefnoNsV13/mhcRefnoNs13) (mhcRefnoNs13) Mhcref July 2011
(mhcRefnoNsV14/mhcRefnoNs14) (mhcRefnoNs14) Mhcref July 2011
(mhcRefnoNsV15/mhcRefnoNs15) (mhcRefnoNs15) Mhcref July 2011
(mhcRefnoNsV16/mhcRefnoNs16) (mhcRefnoNs16) Mhcref July 2011
(mhcRefnoNsV17/mhcRefnoNs17) (mhcRefnoNs17) Mhcref July 2011
(mhcRefnoNsV5/mhcRefnoNs5) (mhcRefnoNs5) Mhcref July 2011
(mhcRefnoNsV6/mhcRefnoNs6) (mhcRefnoNs6) Mhcref July 2011
(mhcRefnoNsV7/mhcRefnoNs7) (mhcRefnoNs7) Mhcref July 2011
(mhcRefnoNsV8/mhcRefnoNs8) (mhcRefnoNs8) Mhcref July 2011
(mhcRefnoNsV8/mhcRefnoNs9) (mhcRefnoNs9) Mhcref June 2011
(mhcRefnoNsV1/mhcRefnoNs) (mhcRefnoNs) Mhcref June 2011
(mhcRefnoNsV3/mhcRefnoNs3) (mhcRefnoNs3) Mhcref June 2011
(mhcRefnoNsV4/mhcRefnoNs4) (mhcRefnoNs4) Mhcref Mar. 2012
(mhcRefnoNsV22/mhcRefnoNs22) (mhcRefnoNs22) Mhcref Mar. 2012
(mhcRefnoNsV23/mhcRefnoNs23) (mhcRefnoNs23) Mhcref Mar. 2012
(mhcRefnoNsV24/mhcRefnoNs24) (mhcRefnoNs24) Mhcref Oct. 2011
(mhcRefnoNsV18/mhcRefnoNs18) (mhcRefnoNs18) Mhcref Oct. 2011
(mhcRefnoNsV19/mhcRefnoNs19) (mhcRefnoNs19) Mhcref Oct. 2011
(mhcRefnoNsV20/mhcRefnoNs20) (mhcRefnoNs20) Mhcref Oct. 2011
(mhcRefnoNsV21/mhcRefnoNs21) (mhcRefnoNs21) Microbat Jul. 2010 (Broad Institute
Myoluc2.0/myoLuc2) (myoLuc2) Microbat Mar. 2006 (Broad/myoLuc1) (myoLuc1)
Microcystis aeruginosa NIES-843 (27835) Microworm Feb. 2013
(WS240/Pred3/panRed1) (panRed1) Minke whale Oct. 2013 (BalAcu1.0/balAcu1)
(balAcu1) Mm10haps Dec. 2011 (Mouse strains/mm10Strains1) (mm10Strains1)
Moorella thermoacetica ATCC 39073 (moorTher_ATCC39073) Mosquito (Aedes aegypti)
(AaegL1) Mosquito (Anopheles gambiae) (AgamP3) Mosquito (Culex quinquefasciatus)
(CpipJ1) Mouse Aug. 2005 (NCBI35/mm7) (mm7) Mouse Aug. 2018 (GRCm38B/GRCm38B)
(GRCm38B) Mouse Dec. 2011 (GRCm38/mm10) (mm10) Mouse Feb. 2006 (NCBI36/mm8)
(mm8) Mouse July 2007 (NCBI37/mm9) (mm9) Mouse May 2004 (mm5) Mouse lemur Feb.
2017 (Mmur_3.0/micMur3) (micMur3) Mouse lemur Jul. 2007 (Broad/micMur1)
(micMur1) Mouse lemur May 2015 (Mouse lemur/micMur2) (micMur2) Mycobacterium
abscessus (15691) Mycobacterium avium 104 (88) Mycobacterium avium subsp.
paratuberculosis K-10 (91) Mycobacterium bovis AF2122/97 (89) Mycobacterium
bovis BCG str. Pasteur 1173P2 (18059) Mycobacterium gilvum PYR-GCK (15760)
Mycobacterium leprae TN (90) Mycobacterium smegmatis str. MC2 155 (92)
Mycobacterium sp. JLS (16079) Mycobacterium sp. KMS (16081) Mycobacterium sp.
MCS (15762) Mycobacterium tuberculosis CDC1551 (223) Mycobacterium tuberculosis
F11 (15642) Mycobacterium tuberculosis H37Ra (18883) Mycobacterium tuberculosis
H37Rv (mycoTube_H37RV) Mycobacterium ulcerans Agy99 (16230) Mycobacterium
vanbaalenii PYR-1 (15761) Mycoplasma agalactiae PG2 (16095) Mycoplasma
capricolum subsp. capricolum ATCC 27343 (16208) Mycoplasma gallisepticum R (409)
Mycoplasma genitalium G37 (mycoGeni) Mycoplasma hyopneumoniae 232 (13120)
Mycoplasma hyopneumoniae 7448 (10639) Mycoplasma hyopneumoniae J (10675)
Mycoplasma mobile 163K (10697) Mycoplasma mycoides subsp. mycoides SC str. PG1
(10616) Mycoplasma penetrans HF-2 (176) Mycoplasma pneumoniae M129 (99)
Mycoplasma pulmonis UAB CTIP (100) Mycoplasma synoviae 53 (10676) Myxococcus
xanthus DK 1622 (myxoXant_DK_1622) N. americanus Dec. 2013
(WS242/N_americanus_v1/necAme1) (necAme1) Naked mole-rat Jan. 2012 (Broad
HetGla_female_1.0/hetGla2) (hetGla2) Naked mole-rat Jul. 2011 (BGI
HetGla_1.0/hetGla1) (hetGla1) Nanoarchaeum equitans Kin4-M (nanEqu1)
Natronomonas pharaonis DSM 2160 (natrPhar1) Neisseria gonorrhoeae FA 1090
(neisGono_FA1090_1) Neisseria meningitidis 053442 (16393) Neisseria meningitidis
FAM18 (neisMeni_FAM18_1) Neisseria meningitidis MC58 (neisMeni_MC58_1) Neisseria
meningitidis Z2491 (neisMeni_Z2491_1) Neorickettsia sennetsu str. Miyayama
(neorSenn_MIYAYAMA) Nile tilapia Jan. 2011 (Broad oreNil1.0/oreNil1) (oreNil1)
Nile tilapia Jan. 2011 (Broad oreNil1.1/oreNil2) (oreNil2) Nile tilapia Nov.
2016 (ASM185804v2/oreNil3) (oreNil3) Nitratiruptor sp. SB155-2 (18963)
Nitrobacter hamburgensis X14 (13473) Nitrobacter winogradskyi Nb-255
(nitrWino_NB_255) Nitrosococcus oceani ATCC 19707 (nitrOcea_ATCC19707)
Nitrosomonas europaea ATCC 19718 (nitrEuro) Nitrosomonas eutropha C91 (13913)
Nitrosopumilus maritimus SCM1 (19265) Nitrosospira multiformis ATCC 25196
(nitrMult_ATCC25196) Nocardia farcinica IFM 10152 (nocaFarc_IFM10152)
Nocardioides sp. JS614 (nocaJS61) Non-Afrotheria Apr. 24. 2006 (UCSC
Recon/nonAfr13) (nonAfr13) Northern pike Jul 2014 (EsoLuc1.0/esoLuc1) (esoLuc1)
Nostoc sp. PCC 7120 (nostSp) Notfound PATCH Jun. 2013 (GRCh37.p13/grcH37P13)
(grcH37P13) Notyet Oct. 2011 (notYet1/calMil0) (calMil0) Novosphingobium
aromaticivorans DSM 12444 (novoArom_DSM12444) O. volvulus Nov. 2013
(WS241/O_volvulus_Cameroon_v3/oncVol1) (oncVol1) Oceanobacillus iheyensis HTE831
(oceaIhey) Ochrobactrum anthropi ATCC 49188 (19485) Oenococcus oeni PSU-1
(oenoOeni_PSU_1) Onion yellows phytoplasma OY-M (onioYell_PHYTOPLASMA) Opossum
Jan. 2006 (Broad/monDom4) (monDom4) Opossum Oct. 2004 (Broad prelim/monDom1)
(monDom1) Opossum Oct. 2006 (Broad/monDom5) (monDom5) Orangutan Jan. 2018
(Susie_PABv2/ponAbe3) (ponAbe3) Orangutan July 2007 (WUGSC 2.0.2/ponAbe2)
(ponAbe2) Orientia tsutsugamushi str. Boryong (orieTsut_BORYONG) Oxytricha
trifallax Sep. 2015 (WashU ASM129792v1/oxyTri2) (oxyTri2) P. exspectatus Mar.
2014 (WS243/P_exspectatus_v1/priExs1) (priExs1) P. falciparum Plasmodium
falciparum (?/falciparum) (falciparum) P. pacificus Aug. 2014
(WS221/P_pacificus-v2/priPac3) (priPac3) P. pacificus Dec. 2008 (WUGSC
5.0.1/priPac2) (priPac2) P. pacificus Feb. 2007 (WUGSC 5.0/priPac1) (priPac1)
Pacific walrus Jan 2013 (Oros_1.0/odoRosDiv1) (odoRosDiv1) Painted turtle Dec.
2011 (v3.0.1/chrPic1) (chrPic1) Painted turtle Mar. 2014 (v3.0.3/chrPic2)
(chrPic2) Panda Dec. 2009 (BGI-Shenzhen 1.0/ailMel1) (ailMel1) Parabacteroides
distasonis ATCC 8503 (13485) Paracoccus denitrificans PD1222 (paraDeni_PD1222)
Parnell's mustached bat Sep. 2013 (ASM46540v1/ptePar1) (ptePar1) Parrot Jan.
2013 (AV1/amaVit1) (amaVit1) Parvibaculum lavamentivorans DS-1 (17639)
Pasteurella multocida subsp. multocida str. Pm70 (pastMult) Pectobacterium
atrosepticum SCRI1043 (erwiCaro_ATROSEPTICA) Pediococcus pentosaceus ATCC 25745
(pediPent_ATCC25745) Pelobacter carbinolicus DSM 2380 (peloCarb) Pelobacter
propionicus DSM 2379 (13384) Pelodictyon luteolum DSM 273 (peloLute_DSM273)
Pelotomaculum thermopropionicum SI (peloTher_SI) Petrotoga mobilis SJ95 (17679)
Photobacterium profundum SS9 (photProf_SS9) Photorhabdus luminescens subsp.
laumondii TTO1 (photLumi) Picrophilus torridus DSM 9790 (picrTorr1) Pig Apr.
2009 (SGSC 9.53/susScr1) (susScr1) Pig Aug. 2011 (SGSC Sscrofa10.2/susScr3)
(susScr3) Pig Feb. 2017 (Sscrofa11.1/susScr11) (susScr11) Pig May 2010
(Sscrofa9.58) Pig Nov. 2009 (SGSC Sscrofa9.2/susScr2) (susScr2) Pig roundworm
Sep. 2012 (WS229/AscSuum_1.0/ascSuu1) (ascSuu1) Pig-tailed macaque Mar. 2015
(Mnem_1.0/macNem1) (macNem1) Pika Jul. 2008 (Broad/ochPri2) (ochPri2) Pika May
2012 (OchPri3.0/ochPri3) (ochPri3) Pine wood nematode Nov. 2011 (WS229/B.
xylophilus Ka4C1/burXyl1) (burXyl1) Plasmodium falciparum 3d7 10 Sept 2014
(V12.0/plasFalc3D7V12) (plasFalc3D7V12) Platypus Feb. 2007 (ASM227v2/ornAna2)
(ornAna2) Platypus Mar. 2007 (WUGSC 5.0.1/ornAna1) (ornAna1) Polar bear 09
May-2014 (UrsMar_1.0/ursMar1) (ursMar1) Polaromonas naphthalenivorans CJ2
(13418) Polaromonas sp. JS666 (polaJS66) Polynucleobacter sp. QLW-P1DMWA-1
(polyQLWP) Poplar (Populus trichocarpa) (Ptrichocarpa_156) Porphyromonas
gingivalis W83 (porpGing_W83) Prairie deer mouse Dec. 2013 (Pman_1.0/perManBai1)
(perManBai1) Prairie vole Oct. 2012 (MicOch1.0/micOch1) (micOch1) Primate Apr.
24. 2006 (UCSC Recon/priMat13) (priMat13) Princess of Burundi May 2011
(NeoBri1.0/neoBri1) (neoBri1) Proboscis monkey Nov. 2014 (Charlie1.0/nasLar1)
(nasLar1) Prochlorococcus marinus str. AS9601 (13548) Prochlorococcus marinus
str. MIT 9211 (13551) Prochlorococcus marinus str. MIT 9215 (18633)
Prochlorococcus marinus str. MIT 9301 (15746) Prochlorococcus marinus str. MIT
9303 (13496) Prochlorococcus marinus str. MIT 9312 (13910) Prochlorococcus
marinus str. MIT 9313 (220) Prochlorococcus marinus str. MIT 9515 (13617)
Prochlorococcus marinus str. NATL1A (15660) Prochlorococcus marinus str. NATL2A
(13911) Prochlorococcus marinus subsp. marinus str. CCMP1375 (procMari_CCMP1375)
Prochlorococcus marinus subsp. pastoris str. CCMP1986 (213) Propionibacterium
acnes KPA171202 (propAcne_KPA171202) Prosthecochloris vibrioformis DSM 265
(12607) Przewalski horse Jun 2014 (Burgud/equPrz1) (equPrz1) Pseudoalteromonas
atlantica T6c (13454) Pseudoalteromonas haloplanktis TAC125 (pseuHalo_TAC125)
Pseudomonas aeruginosa PA7 (16720) Pseudomonas aeruginosa PAO1 (pseuAeru)
Pseudomonas aeruginosa UCBPP-PA14 (386) Pseudomonas entomophila L48 (16800)
Pseudomonas fluorescens Pf-5 (327) Pseudomonas fluorescens PfO-1 (12)
Pseudomonas mendocina ymp (17457) Pseudomonas putida F1 (13909) Pseudomonas
putida GB-1 (17629) Pseudomonas putida KT2440 (267) Pseudomonas putida W619
(17053) Pseudomonas stutzeri A1501 (16817) Pseudomonas syringae pv. phaseolicola
1448A (12416) Pseudomonas syringae pv. syringae B728a (323) Pseudomonas syringae
pv. tomato str. DC3000 (359) Psychrobacter arcticus 273-4 (psycArct_273_4)
Psychrobacter cryohalolentis K5 (13920) Psychrobacter sp. PRwf-1 (15759)
Psychromonas ingrahamii 37 (psycIngr_37) Pundamilia nyererei Oct 2011
(PunNye1.0/punNye1) (punNye1) Purple Sea Urchin (Strongylocentrotus purpuratus)
v2.6 (Spur_v2.6) Pyrobaculum aerophilum str. IM2 (pyrAer1) Pyrobaculum
arsenaticum DSM 13514 (pyroArse1) Pyrobaculum calidifontis JCM 11548 (pyroCali1)
Pyrobaculum islandicum DSM 4184 (pyroIsla1) Pyrococcus abyssi GE5 (pyrAby1)
Pyrococcus furiosus DSM 3638 (pyrFur2) Pyrococcus horikoshii OT3 (pyrHor1)
Rabbit Apr. 2009 (Broad/oryCun2) (oryCun2) Rabbit May 2005 (Broad/oryCun1)
(oryCun1) Ralstonia eutropha H16 (13603) Ralstonia eutropha JMP134
(ralsEutr_JMP134) Ralstonia metallidurans CH34 (250) Ralstonia solanacearum
GMI1000 (ralsSola) Rat Jul. 2014 (RGSC 6.0/rn6) (rn6) Rat June 2003 (Baylor
3.1/rn3) (rn3) Rat Mar. 2012 (RGSC 5.0/rn5) (rn5) Rat May. 2019 (Regen
Rn0/regenRn0) (regenRn0) Rat Nov. 2004 (Baylor 3.4/rn4) (rn4) Red Flour Beetle
(Tribolium castaneum) (Tcas_3.0) Renibacterium salmoninarum ATCC 33209 (19227)
RepBase Jun. 2012 (hg19/repBase0) (repBase0) RepBase Sep. 2012 (17.08/repBase1)
(repBase1) Reston ebolavirus Aug. 2014 (NC_004161.1/resEbo1) (resEbo1) Rhesus
Feb. 2019 (Mmul_10/rheMac10) (rheMac10) Rhesus Jan. 2006 (MGSC Merged
1.0/rheMac2) (rheMac2) Rhesus Nov. 2014 (UMD MacaM_Assembly_v7/rheMac7)
(rheMac7) Rhesus Nov. 2015 (BCM Mmul_8.0.1/rheMac8) (rheMac8) Rhesus Oct. 2010
(BGI CR_1.0/rheMac3) (rheMac3) Rhizobium etli CFN 42 (rhizEtli_CFN_42) Rhizobium
leguminosarum bv. viciae 3841 (344) Rhodobacter sphaeroides 2.4.1
(rhodSpha_2_4_1) Rhodobacter sphaeroides ATCC 17025 (15755) Rhodobacter
sphaeroides ATCC 17029 (15754) Rhodococcus sp. RHA1 (rhodRHA1) Rhodoferax
ferrireducens T118 (13908) Rhodopirellula baltica SH 1 (pireSp) Rhodopseudomonas
palustris BisA53 (15751) Rhodopseudomonas palustris BisB18 (15750)
Rhodopseudomonas palustris BisB5 (15749) Rhodopseudomonas palustris CGA009
(rhodPalu_CGA009) Rhodopseudomonas palustris HaA2 (15747) Rhodospirillum rubrum
ATCC 11170 (rhodRubr_ATCC11170) Rice (Oryza sativa ssp. japonica var.
Nipponbare) (oryza_sativa_japonica_nipponbare_IRGSP4.0) Rickettsia akari str.
Hartford (12953) Rickettsia bellii OSU 85-389 (17237) Rickettsia bellii RML369-C
(rickBell_RML369_C) Rickettsia canadensis str. McKiel (12952) Rickettsia conorii
str. Malish 7 (42) Rickettsia felis URRWXCal2 (13884) Rickettsia massiliae MTU5
(18271) Rickettsia prowazekii str. Madrid E (43) Rickettsia rickettsii str.
'Sheila Smith' (9636) Rickettsia rickettsii str. Iowa (19943) Rickettsia typhi
str. Wilmington (10679) Rock hyrax Jul. 2008 (Broad/proCap1) (proCap1) Rock
pigeon Feb 2013 (Cliv_1.0/colLiv1) (colLiv1) Rodent Apr. 24. 2006 (UCSC
Recon/rodEnt13) (rodEnt13) Roseiflexus castenholzii DSM 13941 (13462)
Roseiflexus sp. RS-1 (16190) Roseobacter denitrificans OCh 114
(roseDeni_OCH_114) Rubrobacter xylanophilus DSM 9941 (rubrXyla_DSM9941) S.
cerevisae str. S288C (Saccharomyces_cerevisiae_S288C_SGD2010) S. cerevisiae Apr.
2011 (SacCer_Apr2011/sacCer3) (sacCer3) S. cerevisiae June 2008 (SGD/sacCer2)
(sacCer2) S. cerevisiae Oct. 2003 (SGD/sacCer1) (sacCer1) S. purpuratus Apr.
2005 (Baylor 1.1/strPur1) (strPur1) S. purpuratus Feb. 2009 (BCM-HGSC
Spur_v2.5/strPur3) (strPur3) S. purpuratus Jun. 2011 (BCM-HGSC
Spur_v3.1/strPur4) (strPur4) S. purpuratus Sep. 2006 (Baylor 2.1/strPur2)
(strPur2) SARS coronavirus Apr. 2003 (GenBank Apr. 14 '03/sc1) (sc1)
Saccharophagus degradans 2-40 (saccDegr_2_40) Saccharopolyspora erythraea NRRL
2338 (saccEryt_NRRL_2338) Saker falcon Feb 2013 (F_cherrug_v1.0/falChe1)
(falChe1) Salinibacter ruber DSM 13855 (saliRube_DSM13855) Salinispora arenicola
CNS-205 (17109) Salinispora tropica CNB-440 (saliTrop_CNB_440) Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- (13030) Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67 (9618) Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150 (salmEnte_PARATYPI_ATC) Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7 (27803) Salmonella
enterica subsp. enterica serovar Typhi str. CT18 (salmTyph) Salmonella enterica
subsp. enterica serovar Typhi str. Ty2 (salmTyph_TY2) Salmonella typhimurium LT2
(241) Saltwater crocodile June 2011 (UCSC cPoro_v0.1c45/croPor0) (croPor0)
Scarlet macaw Jun 2013 (SMACv1.1/araMac1) (araMac1) Sclater's lemur Aug. 2015
(Eflavifronsk33QCA/eulFla1) (eulFla1) Sea hare Jul. 2013 (aplCal0/aplCal0)
(aplCal0) Sea hare Sept. 2008 (Broad 2.0/aplCal1) (aplCal1) Serratia
proteamaculans 568 (17459) Sheep Aug. 2012 (ISGC Oar_v3.1/oviAri3) (oviAri3)
Sheep Feb. 2010 (ISGC Ovis_aries_1.0/oviAri1) (oviAri1) Sheep Nov. 2015
(Oar_v4.0/oviAri4) (oviAri4) Sheepshead minnow Jul 2014
(C_variegatus-1.0/cypVar1) (cypVar1) Shewanella amazonensis SB2B (shewAmaz)
Shewanella baltica OS155 (shewBalt) Shewanella baltica OS185 (17643) Shewanella
baltica OS195 (13389) Shewanella denitrificans OS217 (shewDeni) Shewanella
frigidimarina NCIMB 400 (shewFrig) Shewanella halifaxensis HAW-EB4 (20241)
Shewanella loihica PV-4 (shewLoihPV4) Shewanella oneidensis MR-1 (shewOnei)
Shewanella pealeana ATCC 700345 (17415) Shewanella putrefaciens CN-32
(shewPutrCN32) Shewanella sediminis HAW-EB3 (18789) Shewanella sp. ANA-3
(shewANA3) Shewanella sp. MR-4 (shewMR4) Shewanella sp. MR-7 (shewMR7)
Shewanella sp. W3-18-1 (shewW318) Shewanella woodyi ATCC 51908 (17455) Shigella
boydii Sb227 (13146) Shigella dysenteriae Sd197 (13145) Shigella flexneri 2a
str. 2457T (408) Shigella flexneri 2a str. 301 (shigFlex_2A) Shigella flexneri 5
str. 8401 (16375) Shigella sonnei Ss046 (13151) Shrew Aug. 2008 (Broad/sorAra2)
(sorAra2) Shrew June 2006 (Broad/sorAra1) (sorAra1) Silicibacter pomeroyi DSS-3
(siliPome_DSS_3) Silicibacter sp. TM1040 (13040) Silkworm (Bombyx_mori_p50T_2.0)
Simhumanmammal Oct. 2011 (simHumanMammal/simHumanMammal) (simHumanMammal) Simmam
Jan. 2011 (SimMamV1/simHumanMam) (simHumanMam) Simprim Jan. 2011
(SimPrimV1/simHumanPrim) (simHumanPrim) Simrefmam Jan. 2011
(SimRefMamV1/simRefMam) (simRefMam) Sinorhizobium medicae WSM419 (16304)
Sinorhizobium meliloti 1021 (sinoMeli) Sloth Jul. 2008 (Broad/choHof1) (choHof1)
Snail Jun. 2013 (bioGla0/bioGla0) (bioGla0) Sodalis glossinidius str.
'morsitans' (sodaGlos_MORSITANS) Solibacter usitatus Ellin6076
(soliUsit_ELLIN6076) Sooty mangabey Mar. 2015 (Caty_1.0/cerAty1) (cerAty1)
Sorangium cellulosum 'So ce 56' (28111) Southern platyfish Jan 2012
(Xiphophorus_maculatus-4.4.2/xipMac1) (xipMac1) Sperm whale Sep. 2013
(Physeter_macrocephalus-2.0.2/phyCat1) (phyCat1) Sphingomonas wittichii RW1
(17343) Sphingopyxis alaskensis RB2256 (sphiAlas_RB2256) Spiny softshell turtle
May 2013 (ASM38561v1/apaSpi1) (apaSpi1) Spotted gar Dec 2011 (LepOcu1/lepOcu1)
(lepOcu1) Squirrel Feb. 2008 (Broad/speTri1) (speTri1) Squirrel Nov. 2011
(Broad/speTri2) (speTri2) Squirrel monkey Oct. 2011 (Broad/saiBol1) (saiBol1)
Staph Feb. 2006 (ASM1342v1/staAur1) (staAur1) Staph Feb. 2006
(USA300_FPR3757/staAur2) (staAur2) Staphylococcus aureus RF122 (63)
Staphylococcus aureus subsp. aureus COL (238) Staphylococcus aureus subsp.
aureus JH1 (15758) Staphylococcus aureus subsp. aureus JH9 (15757)
Staphylococcus aureus subsp. aureus MRSA252 (265) Staphylococcus aureus subsp.
aureus MSSA476 (266) Staphylococcus aureus subsp. aureus MW2 (306)
Staphylococcus aureus subsp. aureus Mu3 (18509) Staphylococcus aureus subsp.
aureus Mu50 (stapAure_MU50) Staphylococcus aureus subsp. aureus N315 (264)
Staphylococcus aureus subsp. aureus NCTC 8325 (237) Staphylococcus aureus subsp.
aureus USA300 (16313) Staphylococcus aureus subsp. aureus USA300_TCH1516 (19489)
Staphylococcus aureus subsp. aureus str. Newman (18801) Staphylococcus
epidermidis ATCC 12228 (279) Staphylococcus epidermidis RP62A (64)
Staphylococcus haemolyticus JCSC1435 (12508) Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305 (15596) Staphylothermus marinus F1 (stapMari1)
Star-nosed mole Mar 2012 (ConCri1.0/conCri1) (conCri1) Starlet sea anemone Jun.
2007 (JGI-PDF/nemVec1) (nemVec1) Stickleback Feb. 2006 (Broad/gasAcu1) (gasAcu1)
Straw colored fruit bat 13 Sep 2013 (ASM46528v1/eidHel1) (eidHel1) Streptococcus
agalactiae 2603V/R (330) Streptococcus agalactiae A909 (326) Streptococcus
agalactiae NEM316 (334) Streptococcus gordonii str. Challis substr. CH1 (66)
Streptococcus mutans UA159 (333) Streptococcus pneumoniae D39 (16374)
Streptococcus pneumoniae Hungary19A-6 (28035) Streptococcus pneumoniae R6 (278)
Streptococcus pneumoniae TIGR4 (277) Streptococcus pyogenes M1 GAS
(strePyog_M1_GAS) Streptococcus pyogenes MGAS10270 (16364) Streptococcus
pyogenes MGAS10394 (12469) Streptococcus pyogenes MGAS10750 (16366)
Streptococcus pyogenes MGAS2096 (16365) Streptococcus pyogenes MGAS315 (311)
Streptococcus pyogenes MGAS5005 (13888) Streptococcus pyogenes MGAS6180 (13887)
Streptococcus pyogenes MGAS8232 (286) Streptococcus pyogenes MGAS9429 (16363)
Streptococcus pyogenes SSI-1 (301) Streptococcus pyogenes str. Manfredo (270)
Streptococcus sanguinis SK36 (13942) Streptococcus suis 05ZYH33 (17153)
Streptococcus suis 98HAH33 (17155) Streptococcus thermophilus CNRZ1066 (13163)
Streptococcus thermophilus LMD-9 (13773) Streptococcus thermophilus LMG 18311
(13162) Streptomyces avermitilis MA-4680 (189) Streptomyces coelicolor A3(2)
(streCoel) Sudan ebolavirus Aug. 2014 (NC_006432.1/sudEbo1) (sudEbo1) Sulfolobus
acidocaldarius DSM 639 (sulfAcid1) Sulfolobus solfataricus P2 (sulSol1)
Sulfolobus tokodaii str. 7 (sulfToko1) Sulfurimonas denitrificans DSM 1251
(thioDeni_ATCC33889) Sulfurovum sp. NBC37-1 (18965) Symbiobacterium thermophilum
IAM 14863 (symbTher_IAM14863) Synechococcus elongatus PCC 6301 (13282)
Synechococcus elongatus PCC 7942 (10645) Synechococcus sp. CC9311 (12530)
Synechococcus sp. CC9605 (13643) Synechococcus sp. CC9902 (13655) Synechococcus
sp. JA-2-3B'a(2-13) (16252) Synechococcus sp. JA-3-3Ab (16251) Synechococcus sp.
PCC 7002 (28247) Synechococcus sp. RCC307 (13654) Synechococcus sp. WH 7803
(13642) Synechococcus sp. WH 8102 (syneSp_WH8102) Synechocystis sp. PCC 6803
(synePCC6) Syntrophobacter fumaroxidans MPOB (syntFuma_MPOB) Syntrophomonas
wolfei subsp. wolfei str. Goettingen (syntWolf_GOETTINGEN) Syntrophus
aciditrophicus SB (syntAcid_SB) T. castaneum Sep. 2005 (Baylor 2.0/triCas2)
(triCas2) Tai forest ebolavirus Aug. 2014 (NC_014372.1/taiEbo1) (taiEbo1)
Tarsier Aug. 2008 (Broad/tarSyr1) (tarSyr1) Tarsier Sep. 2013
(Tarsius_syrichta-2.0.1/tarSyr2) (tarSyr2) Tasmanian devil Feb. 2011 (WTSI
Devil_ref v7.0/sarHar1) (sarHar1) Tenrec July 2005 (Broad/echTel1) (echTel1)
Tenrec Nov. 2012 (Broad/echTel2) (echTel2) Tetraodon Feb. 2004 (Genoscope
7/tetNig1) (tetNig1) Tetraodon Mar. 2007 (Genoscope 8.0/tetNig2) (tetNig2)
Theobroma cacao Dec 2010 (CIRAD/Theobroma cacao Belizian Criollo) (Tcacao_1.0)
Thermoanaerobacter pseudethanolicus ATCC 33223 (13901) Thermoanaerobacter sp.
X514 (16394) Thermoanaerobacter tengcongensis MB4 (therTeng) Thermobifida fusca
YX (therFusc_YX) Thermococcus kodakarensis KOD1 (therKoda1) Thermofilum pendens
Hrk 5 (therPend1) Thermoplasma acidophilum DSM 1728 (therAcid1) Thermoplasma
volcanium GSS1 (therVolc1) Thermosipho melanesiensis BI429 (17249)
Thermosynechococcus elongatus BP-1 (therElon) Thermotoga lettingae TMO (15644)
Thermotoga maritima MSB8 (therMari) Thermotoga petrophila RKU-1 (therPetr_RKU_1)
Thermotoga sp. RQ2 (19543) Thermus thermophilus HB27 (therTher_HB27) Thermus
thermophilus HB8 (therTher_HB8) Thiobacillus denitrificans ATCC 25259
(thioDeni_ATCC25259) Thiomicrospira crunogena XCL-2 (thioCrun_XCL_2) Threadworm
Apr. 2011 (WS226/S. ratti ED321/strRat1) (strRat1) Threadworm Sep. 2014 (S.
ratti ED321/strRat2) (strRat2) Tibetan antelope May 2013 (PHO1.0/panHod1)
(panHod1) Tibetan frog Mar. 2015 (BGI_ZX_2015/nanPar1) (nanPar1) Tibetan ground
jay Jan 2013 (PseHum1.0/pseHum1) (pseHum1) Tiger rockfish 22 Oct-2013
(Snig1.0/sebNig1) (sebNig1) Tongue sole 28 Jan-2014 (Cse_v1.0/cynSem1) (cynSem1)
Tree shrew Dec. 2006 (Broad/tupBel1) (tupBel1) Treponema denticola ATCC 35405
(4) Treponema pallidum subsp. pallidum str. Nichols (trepPall) Trichinella Jan.
2011 (WS225/Trichinella_spiralis-3.7.1/triSpi1) (triSpi1) Trichodesmium
erythraeum IMS101 (tricEryt_IMS101) Tropheryma whipplei TW08/27
(tropWhip_TW08_27) Tropheryma whipplei str. Twist (95) Turkey Dec. 2009 (TGC
Turkey_2.01/melGal1) (melGal1) Turkey Nov. 2014 (Turkey_5.0/melGal5) (melGal5)
Upper Galilee mountains blind mole rat Jun 2014 (S.galili_v1.0/nanGal1)
(nanGal1) Ureaplasma parvum serovar 3 str. ATCC 27815 (19087) Ureaplasma parvum
serovar 3 str. ATCC 700970 (ureaUrea) Verminephrobacter eiseniae EF01-2
(vermEise_EF01_2) Vibrio cholerae O1 biovar eltor str. N16961 (vibrChol1) Vibrio
cholerae O395 (vibrChol_O395_1) Vibrio fischeri ES114 (vibrFisc_ES114_1) Vibrio
harveyi ATCC BAA-1116 (19857) Vibrio parahaemolyticus RIMD 2210633 (vibrPara1)
Vibrio vulnificus CMCP6 (vibrVuln_CMCP6_1) Vibrio vulnificus YJ016
(vibrVuln_YJ016_1) Wallaby Nov. 2007 (Baylor 1.0/macEug1) (macEug1) Wallaby Sep.
2009 (TWGS Meug_1.1/macEug2) (macEug2) Water buffalo Sep. 2013
(UMD_CASPUR_WB_2.0/bubBub1) (bubBub1) Weddell seal Mar 2013 (LepWed1.0/lepWed1)
(lepWed1) Whipworm Jul. 2014 (WS243/T. suis DCEP-RM93M male/triSui1) (triSui1)
White rhinoceros May 2012 (CerSimSim1.0/cerSim1) (cerSim1) White throated
tinamou Jun 2014 (ASM70537v1/tinGut1) (tinGut1) White-faced sapajou Apr. 2016
(Cebus_imitator-1.0/cebCap1) (cebCap1) White-throated sparrow Apr 2013
(ASM38545v1/zonAlb1) (zonAlb1) Wigglesworthia glossinidia endosymbiont of
Glossina brevipalpis (wiggBrev) Wild yak Oct 2011 (BosGru_v2.0/bosMut1)
(bosMut1) Wolbachia endosymbiont of Drosophila melanogaster
(wolbEndo_OF_DROSOPHIL) Wolbachia endosymbiont strain TRS of Brugia malayi
(12475) Wolinella succinogenes DSM 1740 (woliSucc) X. tropicalis Aug. 2005 (JGI
4.1/xenTro2) (xenTro2) X. tropicalis Jul. 2016 (Xenopus_tropicalis_v9.1/xenTro9)
(xenTro9) X. tropicalis Nov. 2009 (JGI 4.2/xenTro3) (xenTro3) X. tropicalis Oct.
2004 (JGI 3.0/xenTro1) (xenTro1) X. tropicalis Sep. 2012 (JGI 7.0/xenTro7)
(xenTro7) Xanthobacter autotrophicus Py2 (15756) Xanthomonas axonopodis pv.
citri str. 306 (297) Xanthomonas campestris pv. campestris str. 8004 (15)
Xanthomonas campestris pv. campestris str. ATCC 33913 (xantCamp) Xanthomonas
campestris pv. vesicatoria str. 85-10 (13649) Xanthomonas oryzae pv. oryzae
KACC10331 (12931) Xanthomonas oryzae pv. oryzae MAFF 311018 (16297) Xanthomonas
oryzae pv. oryzae PXO99A (Xanthomonas_oryzae_PXO99A) Xylella fastidiosa 9a5c
(xyleFast) Xylella fastidiosa M12 (17823) Xylella fastidiosa Temecula1 (285)
Yangtze river dolphin 31 Jul 2013 (Lipotes_vexillifer_v1/lipVex1) (lipVex1)
Yellowbelly pufferfish May 2013 (version 1 of Takifugu flavidus genome/takFla1)
(takFla1) Yersinia enterocolitica subsp. enterocolitica 8081 (190) Yersinia
pestis Angola (16067) Yersinia pestis Antiqua (16645) Yersinia pestis CO92
(yersPest_CO92) Yersinia pestis KIM (288) Yersinia pestis Nepal516 (16646)
Yersinia pestis Pestoides F (16700) Yersinia pestis biovar Microtus str. 91001
(10638) Yersinia pseudotuberculosis IP 31758 (16070) Yersinia pseudotuberculosis
IP 32953 (12950) Yersinia pseudotuberculosis YPIII (28743) Zaire ebolavirus Aug.
2014 (NC_002549.1/zaiEbo1) (zaiEbo1) Zebra finch Feb. 2013 (WashU
taeGut324/taeGut2) (taeGut2) Zebra finch Jul. 2008 (WUGSC 3.2.4/taeGut1)
(taeGut1) Zebra mbuna Mar 2012 (MetZeb1.1/mayZeb1) (mayZeb1) Zebrafish Dec. 2008
(Zv8/danRer6) (danRer6) Zebrafish Jul. 2010 (Zv9/danRer7) (danRer7) Zebrafish
July 2007 (Zv7/danRer5) (danRer5) Zebrafish Mar. 2006 (Zv6/danRer4) (danRer4)
Zebrafish May 2005 (Zv5/danRer3) (danRer3) Zebrafish May 2017 (GRCz11/danRer11)
(danRer11) Zebrafish Sep. 2014 (GRCz10/danRer10) (danRer10) Zymomonas mobilis
subsp. mobilis ZM4 (zymoMobi_ZM4) chimp/human Jun. 2008 (UCSC Recon/homPan20)
(homPan20) hg19Haplotypes Feb. 2009 (GRCh37/hg19Haps) (hg19Haps) orang/human
Jun. 2008 (UCSC Recon/homIni20) (homIni20) pUC18 Plasmid (pUC18) phiX174 (phiX)
tarInv Dec. 2013 (GRCh38Tar/tarIhg38) (tarIhg38) uncultured methanogenic
archaeon RC-I (uncuMeth_RCI)
Close Start Reset
 
Drop files here

Size Status

Collection Type:
List

List Pair List of Pairs File Type:
Auto-detect

Auto-detectab1agilentbrukeryep.d.taragilentmasshunter.d.taragpampvis2arffasn1asn1-binaryaugustusaxtbambcfbcf_uncompressedbcsl.modelbcsl.tsbedbed12bed6bed_tabix.gzbedgraphbedstrictbgzipbigbedbigwigbilbiom1biom2blastxmlblibbref3brukerbaf.d.tarbrukertdf.d.tarbuscastepcelcellchira.sqlitechrintcifcismlckptcmapcmlconsensusxmlcoolcpscptcramcsfastacsvctctl.resultcuffdiff.sqlitecxbd3_hierarchydaadada2_dadadada2_errorratesdada2_mergepairsdada2_sequencetabledada2_uniquesdbndbnsfp.tabulardcddeeptools_compute_matrix_archivedeeptools_coverage_matrixden_fmtdlibdrfdtadta2ddziedredtaelandelandmultielibemblencodepeakexcel.xlsexpression.jsonextxyzfaifast5.tarfast5.tar.bz2fast5.tar.gzfastafasta.gzfastgfastqfastq.bz2fastq.gzfastqcssangerfastqcssanger.bz2fastqcssanger.gzfastqilluminafastqillumina.bz2fastqillumina.gzfastqsangerfastqsanger.bz2fastqsanger.gzfastqsolexafastqsolexa.bz2fastqsolexa.gzfcsfeaturexmlffdataffindexfitsflowclrflowframeflowmfiflowscoreflowsetflowstat1flowstat2flowstat3flowtextflvfpsfqtocfsomgafa.sqlitegalgatk_dbsnpgatk_intervalgatk_recalgatk_reportgatk_tranchegemini.sqlitegenbankgenbank.gzgenenotebookgeojsongfa1gfa1.gzgfa2gfa2.gzgffgff3gff3.bz2gff3.gzgff_tabix.gzgiigii.gzgmsh.geogmsh.mshgprgrdgrd.tgzgribgrogtfh5h5adh5mlmhdf4hdrhdthep.roothexrd.accepted_orientationshexrd.eta_ome.npzhexrd.images.npzhexrd.materials.h5hexrd.scored_orientations.npzhexrd.ymlhhrhlfhmm2hmm3icmidatidpdbidxmlimgt.jsoninchiinpinpcrdintermine_tabularintervalipynbitpjellyfishjp2jsonjsonldjuicer_medium_tabix.gzkallisto.idxkroeniklavlenloommafmascotxmlmaskinfo-asn1maskinfo-asn1-binarymcoolmdpmemepspmemexmlmeryldbmetacyto_clr.txtmetacyto_stats.txtmetacyto_summary.txtmgfmkvmolmol2mongodbmothur.accnosmothur.alignmothur.align.checkmothur.align.reportmothur.axesmothur.cons.taxonomymothur.count_tablemothur.designmothur.distmothur.filtermothur.filtered.masked.quanmothur.filtered.quanmothur.freqmothur.groupsmothur.listmothur.lower.distmothur.mapmothur.masked.quanmothur.namesmothur.oligosmothur.otumothur.otu.corrmothur.otulabelsmothur.pair.distmothur.quanmothur.rabundmothur.rdp.taxonomymothur.ref.taxonomymothur.relabundmothur.sabundmothur.seq.taxonomymothur.sff.flowmothur.sharedmothur.square.distmothur.summarymothur.tax.summarymothur.tremp3mp4mpgmrcmrmms2mshmspmtxmz.sqlitemz5mzdatamzidmzmlmzqmzqcmztabmztab2mzxmln3ncbi_genome_dataset.zipncbitaxonomy.sqlitendxneper.mscellneper.pointsneper.points.tsvneper.tesrneper.tessnetcdfnewicknexnhxnii1nii1.gznii2nii2.gznmrmlno_unzip.zipnpzntoboodgiome.tiffonnxoswowloxlicgoxligloxlingoxlissoxlistoxlitspafpaf.gzparparamparamxmlparquetpdbpdbqtpdfpeffpeplistpeptideshaker_archivepepxmlpepxml.tsvpharphylipphyloseqphyloxmlpicard_interval_listpileuppithya.modelpithya.propertypithya.resultplyasciiplybinarypngpostgresqlpovpqppqrpretextprjprmtopprobamprobedprotobuf2protobuf3protxmlprotxml.tsvpslpsmspssm-asn1ptkscmpqcmlqiime2.tabularqname_sorted.bamqual454qualilluminaqualsolexaqualsolidqzaqzvrdatardata.camera.negativerdata.camera.positiverdata.camera.quickrdata.msnbase.rawrdata.scerdata.xcms.fillpeaksrdata.xcms.findchrompeaksrdata.xcms.grouprdata.xcms.rawrdata.xcms.retcorrdfrdock_asrdsrma6rna_epssamsbmlscfscidxscoolsdfsearchgui_archivesf3sffsifsmatsmisnaphmmsnpeffdbsnpmatrixsnptestsource.csource.cppsource.cssource.gosource.hsource.pysource.rsspec.xmlsplib_noindexsqlitesqmasssrasra_manifest.tabularstarstlstockholmstorm.checkstorm.sampletabulartabular.gztandemtartaxonomytcktextgridtgzthermo.rawtifftomltoptprtrackhubtrafoxmltramltrktrrtsvttltwobittxtuniprotxmlunsorted.bamvcfvcf_bgzipvelvgvisium.tar.gzvtkasciivtkbinarywatersmasslynx.raw.tarwavwiff.tarwiff2.tarwigxgxgmmlxlsxxmfaxmlxquest.xmlxsdxtcxvgxyzyamlzipzset.geof
Genome (set all):
unspecified (?)

unspecified (?) A. ceylanicum Mar. 2014 (WS243/Acey_2013.11.30.genDNA/ancCey1)
(ancCey1) A. gambiae Feb. 2003 (IAGEC MOZ2/anoGam1) (anoGam1) A. gambiae Oct.
2006 (AgamP3/anoGam3) (anoGam3) A. mellifera 04 Nov 2010 (Amel_4.5/apiMel4)
(apiMel4) A. mellifera Jan. 2005 (Baylor 2.0/apiMel2) (apiMel2) A. mellifera
July 2004 (Baylor 1.2/apiMel1) (apiMel1) A. mellifera Nov. 2010
(GCF_000002195.4/Amel_4.5) (Amel_4.5) Aardvark May 2012 (OryAfe1.0/oryAfe1)
(oryAfe1) Acaryochloris marina MBIC11017 (12997) Acholeplasma laidlawii PG-8A
(19259) Acidiphilium cryptum JF-5 (acidCryp_JF_5) Acidobacteria bacterium
Ellin345 (acidBact_ELLIN345) Acidothermus cellulolyticus 11B (acidCell_11B)
Acidovorax avenae subsp. citrulli AAC00-1 (15708) Acidovorax sp. JS42 (acidJS42)
Acinetobacter baumannii (13001) Acinetobacter baumannii (28921) Acinetobacter
baumannii ATCC 17978 (17477) Acinetobacter baumannii Oct. 2012
(aciBauTYTH_1/aciBauTYTH_1) (aciBauTYTH_1) Acinetobacter sp. ADP1 (acinSp_ADP1)
Actinobacillus pleuropneumoniae L20 (actiPleu_L20) Actinobacillus
pleuropneumoniae serovar 3 str. JL03 (19135) Actinobacillus succinogenes 130Z
(13370) Aeromonas hydrophila subsp. hydrophila ATCC 7966 (aeroHydr_ATCC7966)
Aeromonas salmonicida subsp. salmonicida A449 (16723) Aeropyrum pernix K1
(aerPer1) African clawed frog Aug. 2016 (Xenopus_laevis_v2/xenLae2) (xenLae2)
Afrotheria Apr. 24. 2006 (UCSC Recon/afrOth13) (afrOth13) Agrobacterium
tumefaciens str. C58 (283) Alcanivorax borkumensis SK2 (alcaBork_SK2)
Alkalilimnicola ehrlichei MLHE-1 (alkaEhrl_MLHE_1) Alkaliphilus metalliredigens
QYMF (13006) Alkaliphilus oremlandii OhILAs (16083) Alpaca Jul. 2008
(Broad/vicPac1) (vicPac1) Alpaca Mar. 2013 (Vicugna_pacos-2.0.1/vicPac2)
(vicPac2) Amazon molly 28 Oct-2013 (Poecilia_formosa-5.1.2/poeFor1) (poeFor1)
American alligator Aug. 2012 (allMis0.2/allMis1) (allMis1) American alligator
November 2011 (UCSC aMiss_v0.1c27/allMis0) (allMis0) Amur tiger 06 Sep 2013
(PanTig1.0/panTig1) (panTig1) Anabaena variabilis ATCC 29413
(anabVari_ATCC29413) Anaeromyxobacter dehalogenans 2CP-C (anaeDeha_2CP_C)
Anaeromyxobacter sp. Fw109-5 (17729) Anaplasma marginale str. St. Maries
(anapMarg_ST_MARIES) Anaplasma phagocytophilum HZ (336) Angolan colobus Mar.
2015 (Cang.pa_1.0/colAng1) (colAng1) Aquifex aeolicus VF5 (aquiAeol) Arabidopsis
lyrata (Araly1) Arabidopsis thaliana TAIR10 (Arabidopsis_thaliana_TAIR10)
(Arabidopsis_thaliana_TAIR10) Arabidopsis thaliana TAIR7 (araTha1) Arabidopsis
thaliana TAIR8 (arabidopsis_tair8) Arabidopsis thaliana TAIR9 (arabidopsis)
Archaeoglobus fulgidus DSM 4304 (archFulg1) Arcobacter butzleri RM4018 (16319)
Armadillo Dec. 2011 (Baylor/dasNov3) (dasNov3) Armadillo Jul. 2008
(Broad/dasNov2) (dasNov2) Armadillo May 2005 (Broad/dasNov1) (dasNov1)
Arthrobacter aurescens TC1 (12512) Arthrobacter sp. FB24 (arthFB24) Aster
yellows witches'-broom phytoplasma AYWB (13478) Atlantic cod May 2010 (Genofisk
GadMor_May2010/gadMor1) (gadMor1) Axolotl Dec. 2018 (ASM291563v2/ambMex2)
(ambMex2) Axolotl Feb. 2018 (ASM291563v1/ambMex1) (ambMex1) Azoarcus sp. BH72
(13217) Azoarcus sp. EbN1 (azoaSp_EBN1) Azorhizobium caulinodans ORS 571
(azorCaul2) Baboon Apr. 2017 (Panu_3.0/papAnu4) (papAnu4) Baboon Feb. 2013
(Baylor Panu_2.0/papAnu3) (papAnu3) Baboon Mar. 2012 (Baylor Panu_2.0/papAnu2)
(papAnu2) Baboon Nov. 2008 (Baylor Pham_1.0/papHam1) (papHam1) Bacillus
amyloliquefaciens FZB42 (13403) Bacillus anthracis str. 'Ames Ancestor' (10784)
Bacillus anthracis str. Ames (baciAnth_AMES) Bacillus anthracis str. Sterne
(10878) Bacillus cereus ATCC 10987 (74) Bacillus cereus ATCC 14579 (384)
Bacillus cereus E33L (12468) Bacillus cereus subsp. cytotoxis NVH 391-98 (13624)
Bacillus clausii KSM-K16 (13291) Bacillus halodurans C-125 (baciHalo) Bacillus
licheniformis ATCC 14580 (12388) Bacillus licheniformis ATCC 14580 (13082)
Bacillus pumilus SAFR-032 (20391) Bacillus subtilis subsp. subtilis str. 168
(baciSubt) Bacillus thuringiensis serovar konkukian str. 97-27 (10877) Bacillus
thuringiensis str. Al Hakam (18255) Bacillus weihenstephanensis KBAB4 (13623)
Bacteroides fragilis NCTC 9343 (46) Bacteroides fragilis YCH46 (13067)
Bacteroides thetaiotaomicron VPI-5482 (bactThet_VPI_5482) Bacteroides vulgatus
ATCC 8482 (13378) Bactrian camel Dec 2011 (CB1/camFer1) (camFer1) Barber pole
worm Dec. 2009 (WormBase WS210/haeCon1) (haeCon1) Barber pole worm Jul. 2013
(WormBase WS239/haeCon2) (haeCon2) Bartonella bacilliformis KC583 (16249)
Bartonella henselae str. Houston-1 (bartHens_HOUSTON_1) Bartonella quintana str.
Toulouse (44) Bartonella tribocorum CIP 105476 (28109) Baumannia cicadellinicola
str. Hc (Homalodisca coagulata) (baumCica_HOMALODISCA) Bdellovibrio
bacteriovorus HD100 (bdelBact) Beaver Feb. 2017 (C.can genome v1.0/casCan1)
(casCan1) Bicolor damselfish May 2014 (Stegastes_partitus-1.0.2/stePar1)
(stePar1) Bifidobacterium adolescentis ATCC 15703 (16321) Bifidobacterium longum
NCC2705 (bifiLong) Big brown bat Jul 2012 (EptFus1.0/eptFus1) (eptFus1) Bison
Oct. 2014 (Bison_UMD1.0/bisBis1) (bisBis1) Black flying-fox Aug 2012
(ASM32557v1/pteAle1) (pteAle1) Black lemur Aug. 2015
(Emacaco_refEf_BWA_oneround/eulMac1) (eulMac1) Black rockcod Jul 2014
(NC01/notCor1) (notCor1) Black snub-nosed monkey Aug. 2016 (ASM169854v1/rhiBie1)
(rhiBie1) Bonobo Aug. 2015 (MPI-EVA panpan1.1/panPan2) (panPan2) Bonobo May 2012
(Max-Planck/panPan1) (panPan1) Bordetella bronchiseptica RB50 (bordBron)
Bordetella parapertussis 12822 (25) Bordetella pertussis Tohama I (26)
Bordetella petrii DSM 12804 (28135) Boreoeutherian Apr. 24. 2006 (UCSC
Recon/borEut13) (borEut13) Boreoeutherian Nov. 19. 2005 (UCSC Recon/canHg12)
(canHg12) Borrelia afzelii PKo (17057) Borrelia burgdorferi B31 (borrBurg)
Borrelia garinii PBi (12554) Bradyrhizobium japonicum USDA 110 (bradJapo)
Bradyrhizobium sp. BTAi1 (16137) Bradyrhizobium sp. ORS278 (19575) Brandt's
myotis (bat) 28 Jun 2013 (ASM41265v1/myoBra1) (myoBra1) Brazilian guinea pig
Jan. 2014 (CavAp1.0/cavApe1) (cavApe1) Brown kiwi Jun. 2015 (MPI-EVA
AptMant0/aptMan1) (aptMan1) Brucella abortus biovar 1 str. 9-941 (9619) Brucella
canis ATCC 23365 (20243) Brucella melitensis 16M (brucMeli) Brucella melitensis
biovar Abortus 2308 (16203) Brucella ovis ATCC 25840 (12514) Brucella suis 1330
(320) Brucella suis ATCC 23445 (20371) Brush-tailed rat Apr 2012
(OctDeg1.0/octDeg1) (octDeg1) Buchnera aphidicola str. APS (Acyrthosiphon pisum)
(buchSp) Buchnera aphidicola str. Bp (Baizongia pistaciae) (256) Buchnera
aphidicola str. Cc (Cinara cedri) (16372) Buchnera aphidicola str. Sg
(Schizaphis graminum) (312) Budgerigar Sep. 2011 (WUSTL v6.3/melUnd1) (melUnd1)
Bundibugyo ebolavirus Aug. 2014 (NC_014373.1/bunEbo1) (bunEbo1) Burkholderia
ambifaria AMMD (burkCepa_AMMD) Burkholderia cenocepacia AU 1054
(burkCeno_AU_1054) Burkholderia cenocepacia HI2424 (burkCeno_HI2424)
Burkholderia cenocepacia MC0-3 (17929) Burkholderia mallei ATCC 23344
(burkMall_ATCC23344) Burkholderia mallei NCTC 10229 (13943) Burkholderia mallei
NCTC 10247 (13946) Burkholderia mallei SAVP1 (13947) Burkholderia multivorans
ATCC 17616 (17407) Burkholderia pseudomallei 1106a (burkPseu_1106A) Burkholderia
pseudomallei 1710b (13954) Burkholderia pseudomallei 668 (13953) Burkholderia
pseudomallei K96243 (178) Burkholderia sp. 383 (burk383) Burkholderia
thailandensis E264 (burkThai_E264) Burkholderia vietnamiensis G4 (burkViet_G4)
Burkholderia xenovorans LB400 (burkXeno_LB400) Burton's mouthbreeder Oct 2011
(AstBur1.0/hapBur1) (hapBur1) Bushbaby Dec. 2006 (Broad/otoGar1) (otoGar1)
Bushbaby Mar. 2011 (Broad/otoGar3) (otoGar3) C. angaria Apr. 2012
(WS232/ps1010rel8/caeAng2) (caeAng2) C. angaria Oct. 2010 (WS225/caeAng1)
(caeAng1) C. brenneri Feb. 2008 (WUGSC 6.0.1/caePb2) (caePb2) C. brenneri Jan.
2007 (WUGSC 4.0/caePb1) (caePb1) C. brenneri Nov. 2010 (C. brenneri
6.0.1b/caePb3) (caePb3) C. briggsae Apr. 2011 (WS225/cb4) (cb4) C. briggsae Aug
2005 (WUGSC prelim/cb2) (cb2) C. briggsae Jan. 2007 (WUGSC 1.0/cb3) (cb3) C.
briggsae July 2002 (WormBase cb25.agp8/cb1) (cb1) C. elegans Aug. 2007
(WS180/ce5) (ce5) C. elegans Feb 2009 (WS200/ce7) (ce7) C. elegans Feb. 2013
(WBcel235/ce11) (ce11) C. elegans Jan 2010 (WS210/ce9) (ce9) C. elegans Jan.
2007 (WS170/ce4) (ce4) C. elegans Jun 2009 (WS204/ce8) (ce8) C. elegans Mar.
2004 (WS120/ce2) (ce2) C. elegans March 2005 (WS140/ce3) (ce3) C. elegans May
2008 (WS190/ce6) (ce6) C. elegans Oct. 2010 (WS220/ce10) (ce10) C. intestinalis
Apr. 2011 (Kyoto KH/ci3) (ci3) C. intestinalis Dec. 2002 (JGI 1.0/ci1) (ci1) C.
intestinalis Mar. 2005 (JGI 2.1/ci2) (ci2) C. japonica Sep. 2010 (WUGSC
7.0.1/caeJap3) (caeJap3) C. japonica Aug. 2010 (WUSTL 7.0.1/caeJap4) (caeJap4)
C. japonica Jan. 2009 (WUGSC 4.0.1/caeJap2) (caeJap2) C. japonica Mar. 2008
(WUGSC 3.0.2/caeJap1) (caeJap1) C. remanei Jul. 2007 (WS220/caeRem4) (caeRem4)
C. remanei Mar. 2006 (WUGSC 1.0/caeRem2) (caeRem2) C. remanei March 2005 (WUGSC
prelim/caeRem1) (caeRem1) C. remanei May 2007 (WUGSC 15.0.1/caeRem3) (caeRem3)
C. savignyi Apr. 2003 (Broad/cioSav1) (cioSav1) C. savignyi July 2005 (Sidow Lab
2.0/cioSav2) (cioSav2) C. sp. 5 ju800 Jan. 2012
(WS230/Caenorhabditis_sp_5-JU800-1.0/caeSp51) (caeSp51) C. sp. 7 ju1286 Nov.
2010 (WUSTL 4.0.1/caeSp71) (caeSp71) C. sp. 9 ju1422 Nov. 2010 (WUSTL
3.0.1/caeSp91) (caeSp91) C. tropicalis Nov. 2010 (WS226/WUSTL 3.0.1/caeSp111)
(caeSp111) Cactus Nov. 2010 (CactusV3/cacTus3) (cacTus3) Cactus Oct. 2010
(Ngan10.1/cacTus2) (cacTus2) Cactus Sep. 2010 (CactusV1/cacTus1) (cacTus1)
Caldicellulosiruptor saccharolyticus DSM 8903 (caldSacc_DSM8903) Caldivirga
maquilingensis IC-167 (caldMaqu1) Campylobacter concisus 13826 (17159)
Campylobacter curvus 525.92 (17161) Campylobacter fetus subsp. fetus 82-40
(campFetu_82_40) Campylobacter hominis ATCC BAA-381 (20083) Campylobacter jejuni
RM1221 (campJeju_RM1221) Campylobacter jejuni subsp. doylei 269.97 (17163)
Campylobacter jejuni subsp. jejuni 81-176 (campJeju_81_176) Campylobacter jejuni
subsp. jejuni 81116 (17953) Campylobacter jejuni subsp. jejuni NCTC 11168
(campJeju) Candidatus Blochmannia floridanus (blocFlor) Candidatus Blochmannia
pennsylvanicus str. BPEN (13875) Candidatus Carsonella ruddii PV
(candCars_RUDDII) Candidatus Desulforudis audaxviator MP104C (21047) Candidatus
Korarchaeum cryptofilum OPF8 (16525) Candidatus Methanoregula boonei 6A8
(methBoon1) Candidatus Pelagibacter ubique HTCC1062 (candPela_UBIQUE_HTCC1)
Candidatus Protochlamydia amoebophila UWE25 (paraSp_UWE25) Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica) (16841) Candidatus Sulcia muelleri
GWSS (19617) Candidatus Vesicomyosocius okutanii HA (18267) Cape elephant shrew
Aug 2012 (EleEdw1.0/eleEdw1) (eleEdw1) Cape golden mole Aug 2012
(ChrAsi1.0/chrAsi1) (chrAsi1) Carboxydothermus hydrogenoformans Z-2901
(carbHydr_Z_2901) Cat Dec. 2008 (NHGRI/GTB V17e/felCat4) (felCat4) Cat Mar. 2006
(Broad/felCat3) (felCat3) Cat Nov. 2014 (ICGSC Felis_catus_8.0/felCat8)
(felCat8) Cat Nov. 2017 (Felis_catus_9.0/felCat9) (felCat9) Cat Sep. 2011 (ICGSC
Felis_catus 6.2/felCat5) (felCat5) Catarrhini June 13. 2006 (UCSC Recon/catArr1)
(catArr1) Caulobacter crescentus CB15 (caulCres) Caulobacter sp. K31 (16306)
CentromereY 2013 GrCh38 (centromeres1) Chicken Dec 2015
(Gallus_gallus-5.0/galGal5) (galGal5) Chicken Feb. 2004 (WUGSC 1.0/galGal2)
(galGal2) Chicken Mar. 2018 (GRCg6a/galGal6) (galGal6) Chicken May 2006 (WUGSC
2.1/galGal3) (galGal3) Chicken Nov. 2011 (ICGSC Gallus_gallus-4.0/galGal4)
(galGal4) Chimp Feb. 2011 (CSAC 2.1.4/panTro4) (panTro4) Chimp Jan. 2018
(Clint_PTRv2/panTro6) (panTro6) Chimp Mar. 2006 (CGSC 2.1/panTro2) (panTro2)
Chimp May 2016 (Pan_tro 3.0/panTro5) (panTro5) Chimp Nov. 2003 (CGSC
1.1/panTro1) (panTro1) Chimp Oct. 2010 (CGSC 2.1.3/panTro3) (panTro3) Chinchilla
May 2012 (ChiLan1.0/chiLan1) (chiLan1) Chinese hamster Aug. 2011 (CHO K1 cell
line/criGriChoV1) (criGriChoV1) Chinese hamster Jul. 2013
(C_griseus_v1.0/criGri1) (criGri1) Chinese hamster Jun. 2017
(CHOK1S_HZDv1/criGriChoV2) (criGriChoV2) Chinese pangolin Aug 2014
(M_pentadactyla-1.1.1/manPen1) (manPen1) Chinese softshell turtle Oct 2011
(PelSin_1.0/pelSin1) (pelSin1) Chinese tree shrew Jan 2013 (TupChi_1.0/tupChi1)
(tupChi1) Chlamydia muridarum Nigg (229) Chlamydia trachomatis 434/Bu (28583)
Chlamydia trachomatis A/HAR-13 (13885) Chlamydia trachomatis D/UW-3/CX
(chlaTrac) Chlamydia trachomatis L2b/UCH-1/proctitis (28585) Chlamydophila
abortus S26/3 (355) Chlamydophila caviae GPIC (228) Chlamydophila felis Fe/C-56
(370) Chlamydophila pneumoniae AR39 (247) Chlamydophila pneumoniae CWL029
(chlaPneu_CWL029) Chlamydophila pneumoniae J138 (257) Chlamydophila pneumoniae
TW-183 (420) Chlorobium chlorochromatii CaD3 (chloChlo_CAD3) Chlorobium
phaeobacteroides DSM 266 (12609) Chlorobium tepidum TLS (chloTepi_TLS)
Chloroflexus aurantiacus J-10-fl (59) Chromobacterium violaceum ATCC 12472
(chroViol) Chromohalobacter salexigens DSM 3043 (chroSale_DSM3043) Citrobacter
koseri ATCC BAA-895 (12716) Clavibacter michiganensis subsp. michiganensis NCPPB
382 (clavMich_NCPPB_382) Clavibacter michiganensis subsp. sepedonicus (184)
Clostridium acetobutylicum ATCC 824 (77) Clostridium beijerinckii NCIMB 8052
(12637) Clostridium botulinum A str. ATCC 19397 (19517) Clostridium botulinum A
str. ATCC 3502 (193) Clostridium botulinum A str. Hall (19521) Clostridium
botulinum A3 str. Loch Maree (28507) Clostridium botulinum B1 str. Okra (28505)
Clostridium botulinum F str. Langeland (19519) Clostridium difficile 630 (78)
Clostridium kluyveri DSM 555 (19065) Clostridium novyi NT (16820) Clostridium
perfringens ATCC 13124 (304) Clostridium perfringens SM101 (12521) Clostridium
perfringens str. 13 (79) Clostridium phytofermentans ISDg (16184) Clostridium
tetani E88 (81) Clostridium thermocellum ATCC 27405 (314) Coelacanth Aug. 2011
(Broad/latCha1) (latCha1) Collared flycatcher Jun 2013 (FicAlb1.5/ficAlb2)
(ficAlb2) Collared flycatcher Jun. 2013 (FicAlb1.5/ficAlb1) (ficAlb1) Colwellia
psychrerythraea 34H (colwPsyc_34H) Coquerel's sifaka Mar. 2015
(Pcoq_1.0/proCoq1) (proCoq1) Corynebacterium diphtheriae NCTC 13129 (87)
Corynebacterium efficiens YS-314 (coryEffi_YS_314) Corynebacterium glutamicum
ATCC 13032 (13760) Corynebacterium glutamicum ATCC 13032 (307) Corynebacterium
glutamicum R (19193) Corynebacterium jeikeium K411 (13967) Cow Apr. 2009 (Baylor
Btau_4.2/bosTau5) (bosTau5) Cow Apr. 2018 (ARS-UCD1.2/bosTau9) (bosTau9) Cow
Aug. 2006 (Baylor 3.1/bosTau3) (bosTau3) Cow Aug. 2009 (UMD3.1) (bosTauMd3) Cow
Jun. 2014 (Bos_taurus_UMD_3.1.1/bosTau8) (bosTau8) Cow Mar. 2005 (Baylor
2.0/bosTau2) (bosTau2) Cow Nov. 2009 (Bos_taurus_UMD_3.1/bosTau6) (bosTau6) Cow
Oct. 2007 (Baylor 4.0/bosTau4) (bosTau4) Cow Oct. 2011 (Baylor
Btau_4.6.1/bosTau7) (bosTau7) Coxiella burnetii Dugway 5J108-111 (16721)
Coxiella burnetii RSA 331 (16791) Coxiella burnetii RSA 493 (coxiBurn)
Crab-eating macaque Jun. 2013 (Macaca_fascicularis_5.0/macFas5) (macFas5)
Cytophaga hutchinsonii ATCC 33406 (cytoHutc_ATCC33406) D. albomicans 21 May 2012
(DroAlb_1.0/droAlb1) (droAlb1) D. ananassae Aug. 2005 (Agencourt prelim/droAna2)
(droAna2) D. ananassae Feb. 2006 (droAna3) D. ananassae July 2004 (TIGR/droAna1)
(droAna1) D. biarmipes 04 Mar 2013 (Dbia_2.0/droBia2) (droBia2) D. bipectinata
04 Mar 2013 (Dbip_2.0/droBip2) (droBip2) D. elegans 04 Mar 2013
(Dele_2.0/droEle2) (droEle2) D. erecta Aug. 2005 (Agencourt prelim/droEre1)
(droEre1) D. erecta Feb. 2006 (droEre2) D. eugracilis 04 Mar 2013
(Deug_2.0/droEug2) (droEug2) D. ficusphila 04 Mar 2013 (Dfic_2.0/droFic2)
(droFic2) D. grimshawi Aug. 2005 (Agencourt prelim/droGri1) (droGri1) D.
grimshawi Feb. 2006 (droGri2) D. kikkawai 04 Mar 2013 (Dkik_2.0/droKik2)
(droKik2) D. melanogaster Apr. 2004 (BDGP R4/dm2) (dm2) D. melanogaster Apr.
2006 (BDGP R5/dm3) (dm3) D. melanogaster Aug. 2014 (BDGP Release 6 + ISO1
MT/dm6) (dm6) D. melanogaster Jan. 2003 (BDGP R3/dm1) (dm1) D. miranda 19 Apr
2013 (DroMir_2.2/droMir2) (droMir2) D. mojavensis Aug. 2004 (Agencourt
prelim/droMoj1) (droMoj1) D. mojavensis Aug. 2005 (Agencourt prelim/droMoj2)
(droMoj2) D. mojavensis Feb. 2006 (droMoj3) D. persimilis Oct. 2005
(Broad/droPer1) (droPer1) D. pseudoobscura (dp4) (dp4) D. pseudoobscura 11 Apr
2013 (Dpse_3.0/droPse3) (droPse3) D. pseudoobscura Aug. 2003 (Baylor
freeze1/dp2) (dp2) D. pseudoobscura Nov. 2004 (FlyBase 1.03/dp3) (dp3) D.
rhopaloa 22 Feb 2013 (Drho_2.0/droRho2) (droRho2) D. sechellia Oct. 2005
(Broad/droSec1) (droSec1) D. simulans Apr. 2005 (WUGSC mosaic 1.0/droSim1)
(droSim1) D. simulans Sep. 2014 (ASM75419v2/droSim2) (droSim2) D. suzukii 30 Sep
2013 (Dsuzukii.v01/droSuz1) (droSuz1) D. takahashii 04 Mar 2013
(Dtak_2.0/droTak2) (droTak2) D. virilis Aug. 2005 (Agencourt prelim/droVir2)
(droVir2) D. virilis Feb. 2006 (Agencourt CAF1/droVir3) (droVir3) D. virilis
July 2004 (Agencourt prelim/droVir1) (droVir1) D. willistoni 03 Aug 2006
(dwil_caf1/droWil2) (droWil2) D. willistoni Feb. 2006 (droWil1) D. yakuba 27 Jun
2006 (dyak_caf1/droYak3) (droYak3) D. yakuba Apr. 2004 (WUGSC 1.0/droYak1)
(droYak1) D. yakuba Nov. 2005 (WUGSC 7.1/droYak2) (droYak2) Damara mole rat Sep.
2014 (DMR_v1.0/fukDam1) (fukDam1) David's myotis (bat) Aug 2012
(ASM32734v1/myoDav1) (myoDav1) Dechloromonas aromatica RCB (dechArom_RCB) Deer
Tick (Ixodes scapularis) (IscaW1) Dehalococcoides ethenogenes 195 (dehaEthe_195)
Dehalococcoides sp. BAV1 (15770) Dehalococcoides sp. CBDB1 (15604) Deinococcus
geothermalis DSM 11300 (deinGeot_DSM11300) Deinococcus radiodurans R1 (deinRadi)
Delftia acidovorans SPH-1 (17413) Desulfitobacterium hafniense Y51
(desuHafn_Y51) Desulfococcus oleovorans Hxd3 (18007) Desulfotalea psychrophila
LSv54 (desuPsyc_LSV54) Desulfotomaculum reducens MI-1 (desuRedu_MI_1)
Desulfovibrio desulfuricans G20 (329) Desulfovibrio vulgaris subsp. vulgaris DP4
(17227) Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
(desuVulg_HILDENBOROUG) Dichelobacter nodosus VCS1703A (dichNodo_VCS1703A)
Dinoroseobacter shibae DFL 12 (17417) Dog July 2004 (Broad/canFam1) (canFam1)
Dog May 2003 (TIGR Poodle/canFamPoodle1) (canFamPoodle1) Dog May 2005
(Broad/canFam2) (canFam2) Dog Sep. 2011 (Broad CanFam3.1/canFam3) (canFam3) Dog
heartworm Sep. 2013 (WS240/D. immitis v2.2/dirImm1) (dirImm1) Dolphin Feb. 2008
(Broad/turTru1) (turTru1) Dolphin Oct. 2011 (Baylor Ttru_1.4/turTru2) (turTru2)
Domestic goat May 2012 (CHIR_1.0/capHir1) (capHir1) Drill Mar. 2015
(Mleu.le_1.0/manLeu1) (manLeu1) Eastern happy Jan. 2018 (fAstCal1.1/astCal1)
(astCal1) Ebola virus 49 sequences: 5 Ebola, 2 Marburg strains (eboVir2) Ebola
virus Aug. 2014 (46 strains eboVir1/eboVir1) (eboVir1) Ebola virus Sierra Leone
2014 (G3683/KM034562.1/eboVir3) (eboVir3) Ecoref Feb. 2013 (ecoRef3/ecoRef3)
(ecoRef3) Ecoref Feb. 2013 (ecoRef4/ecoRef4) (ecoRef4) Ecoref Jan. 2013
(ecoRef1/ecoRef1) (ecoRef1) Ecoref Jan. 2013 (ecoRef2/ecoRef2) (ecoRef2)
Egyptian rousette Mar 2016 (Raegyp2.0/rouAeg1) (rouAeg1) Ehrlichia canis str.
Jake (10694) Ehrlichia chaffeensis str. Arkansas (325) Ehrlichia ruminantium
str. Gardel (13356) Ehrlichia ruminantium str. Welgevonden (13355) Ehrlichia
ruminantium str. Welgevonden (ehrlRumi_WELGEVONDEN) Elephant Jul. 2008
(Broad/loxAfr2) (loxAfr2) Elephant Jul. 2009 (Broad/loxAfr3) (loxAfr3) Elephant
May 2005 (Broad/loxAfr1) (loxAfr1) Elephant shark Dec. 2013
(Callorhinchus_milii-6.1.3/calMil1) (calMil1) Enterobacter sakazakii ATCC
BAA-894 (12720) Enterobacter sp. 638 (ente638) Enterococcus faecalis V583
(enteFaec_V583) Erythrobacter litoralis HTCC2594 (erytLito_HTCC2594) Escherichia
coli 536 (16235) Escherichia coli APEC O1 (eschColi_APEC_O1) Escherichia coli C
str. ATCC 8739 (18083) Escherichia coli CFT073 (eschColi_CFT073) Escherichia
coli DH10B (20079) Escherichia coli E24377A (13960) Escherichia coli EC4115
(eschColi_EC4115) Escherichia coli HS (13959) Escherichia coli K12
(eschColi_K12) Escherichia coli O157:H7 EDL933 (259) Escherichia coli O157:H7
str. Sakai (eschColi_O157H7) Escherichia coli SECEC SMS-3-5 (19469) Escherichia
coli TW14359 (eschColi_TW14359) Escherichia coli UTI89 (16259) Escherichia coli
W3110 (16351) Euarchontoglires Apr. 24. 2006 (UCSC Recon/euaGli13) (euaGli13)
European sea bass Apr 2014 (seabass_V1.0/dicLab1) (dicLab1) Eutheria Apr. 24.
2006 (UCSC Recon/eutHer13) (eutHer13) Evosim Feb. 2013 (evoSim1/evoSim1)
(evoSim1) Eye worm Jul. 2012 (WS235/L_loa_Cameroon_isolate/loaLoa1) (loaLoa1)
Ferret Apr. 2011 (MusPutFur1.0/musFur1) (musFur1) Fervidobacterium nodosum
Rt17-B1 (16719) Filarial worm May. 2014 (WS244/B_malayi-3.1/bruMal2) (bruMal2)
Filarial worm Sep. 2007 (TIGR 1.0/bruMal1) (bruMal1) Finegoldia magna ATCC 29328
(18981) Fission Yeast (S. pombe) (Schizosaccharomyces_pombe_1.1) Flag rockfish
22 Oct-2013 (SRub1.0/sebRub1) (sebRub1) Flavobacterium johnsoniae UW101
(flavJohn_UW101) Flavobacterium psychrophilum JIP02/86 (19979) Francisella
philomiragia subsp. philomiragia ATCC 25017 (27853) Francisella tularensis
subsp. holarctica (16421) Francisella tularensis subsp. holarctica FTA (20197)
Francisella tularensis subsp. holarctica OSU18 (17265) Francisella tularensis
subsp. novicida U112 (16088) Francisella tularensis subsp. tularensis FSC198
(17375) Francisella tularensis subsp. tularensis SCHU S4 (franTula_TULARENSIS)
Francisella tularensis subsp. tularensis WY96-3418 (18459) Frankia alni ACN14a
(17403) Frankia sp. CcI3 (franCcI3) Frankia sp. EAN1pec (13915) Fugu Aug. 2002
(JGI 3.0/fr1) (fr1) Fugu Oct. 2004 (JGI 4.0/fr2) (fr2) Fugu Oct. 2011
(FUGU5/fr3) (fr3) Fusobacterium nucleatum subsp. nucleatum ATCC 25586 (fusoNucl)
GRCh37.p10 Sep. 2012 (GRCh37.p10/hg19Patch10) (hg19Patch10) GRCh37.p13 Jun. 2013
(hg19Patch13) GRCh37.p2 Aug. 2009 (GRCh37.p2/hg19Patch2) (hg19Patch2) GRCh37.p5
Jun. 2011 (GRCh37.p5/hg19Patch5) (hg19Patch5) GRCh37.p9 Jul. 2012
(GRCh37.p9/hg19Patch9) (hg19Patch9) GRCh38.p11 Jun. 2017 (hg38Patch11) GRCh38.p2
Dec. 2014 (hg38Patch2) GRCh38.p3 Apr. 2015 (hg38Patch3) GRCh38.p5 Sep. 2015
(hg38Patch5) GRCh38.p6 Dec. 2015 (hg38Patch6) GRCh38.p7 Mar. 2016 (hg38Patch7)
GRCh38.p9 Sep. 2016 (hg38Patch9) GRCm38.p1 Aug. 2012 (GRCm38.p1/mm10Patch1)
(mm10Patch1) GRCm38.p4 Mar. 2015 (mm10Patch4) Garter snake Jun. 2015
(Thamnophis_sirtalis-6.0/thaSir1) (thaSir1) Geobacillus kaustophilus HTA426
(geobKaus_HTA426) Geobacillus thermodenitrificans NG80-2 (geobTher_NG80_2)
Geobacter metallireducens GS-15 (geobMeta_GS15) Geobacter sulfurreducens PCA
(geobSulf) Geobacter uraniireducens Rf4 (geobUran_RF4) Gharial APR 2009
(preliminary/gavGan0) (gavGan0) Gibbon Jan. 2010 (GGSC Nleu1.0/nomLeu1)
(nomLeu1) Gibbon Jun. 2011 (GGSC Nleu1.1/nomLeu2) (nomLeu2) Gibbon Oct. 2012
(GGSC Nleu3.0/nomLeu3) (nomLeu3) Glires Apr. 24. 2006 (UCSC Recon/gliRes13)
(gliRes13) Gloeobacter violaceus PCC 7421 (gloeViol) Gluconacetobacter
diazotrophicus PAl 5 (377) Gluconobacter oxydans 621H (glucOxyd_621H) Golden
eagle May 2014 (AquilaChrysaetos1/aquChr1) (aquChr1) Golden eagle Oct. 2014
(aquChr-1.0.2/aquChr2) (aquChr2) Golden hamster Mar 2013 (MesAur1.0/mesAur1)
(mesAur1) Golden snub-nosed monkey Oct. 2014 (Rrox_v1/rhiRox1) (rhiRox1)
Golden-collared manakin May 2014 (ASM69201v1/manVit1) (manVit1) Gorilla Aug.
2009 (Sanger 4/gorGor2) (gorGor2) Gorilla Dec 2014 (gorGor4.1/gorGor4) (gorGor4)
Gorilla Mar. 2016 (GSMRT3/gorGor5) (gorGor5) Gorilla May 2011
(gorGor3.1/gorGor3) (gorGor3) Gorilla Oct. 2008 (Sanger 0.1/gorGor1) (gorGor1)
Gramella forsetii KT0803 (gramFors_KT0803) Granulibacter bethesdensis CGDNIH1
(granBeth_CGDNIH1) Greater horseshoe bat Sep. 2013 (ASM46549v1/rhiFer1)
(rhiFer1) Green monkey Jun 2013 (Chlorocebus_sabeus 1.0/chlSab1) (chlSab1) Green
monkey Mar. 2014 (Chlorocebus_sabeus 1.1/chlSab2) (chlSab2) Green seaturtle Mar
2013 (CheMyd_1.0/cheMyd1) (cheMyd1) Guinea pig Feb. 2008 (Broad/cavPor3)
(cavPor3) Guppy Apr. 2014 (Guppy_female_1.0/poeRet1) (poeRet1) H.
bacteriophora/m31e Aug. 2011 (WS229/H. bacteriophora 7.0/hetBac1) (hetBac1)
Haemophilus ducreyi 35000HP (38) Haemophilus influenzae 86-028NP (11752)
Haemophilus influenzae PittEE (16400) Haemophilus influenzae PittGG (16401)
Haemophilus influenzae Rd KW20 (haemInfl_KW20) Haemophilus somnus 129PT
(haemSomn_129PT) Haemophilus somnus 2336 (388) Hahella chejuensis KCTC 2396
(haheChej_KCTC_2396) Haloarcula marismortui ATCC 43049 (halMar1) Halobacterium
salinarum R1 (106) Halobacterium sp. NRC-1 (haloHalo1) Haloquadratum walsbyi DSM
16790 (haloWals1) Halorhodospira halophila SL1 (haloHalo_SL1) Hawaiian monk seal
Jun. 2017 (ASM220157v1/neoSch1) (neoSch1) Hbv Apr. 1993 (ViralProj15428/hbv1)
(hbv1) Head Louse (Pediculus humanus) (PhumU1) Hedgehog June 2006
(Broad/eriEur1) (eriEur1) Hedgehog May 2012 (EriEur2.0/eriEur2) (eriEur2)
Helicobacter acinonychis str. Sheeba (heliAcin_SHEEBA) Helicobacter hepaticus
ATCC 51449 (heliHepa) Helicobacter pylori 26695 (heliPylo_26695) Helicobacter
pylori HPAG1 (heliPylo_HPAG1) Helicobacter pylori J99 (heliPylo_J99)
Heliobacterium modesticaldum Ice1 (13427) Herminiimonas arsenicoxydans
(hermArse) Herpetosiphon aurantiacus ATCC 23779 (16523) Hg19 lgg inversion Mar
2013 (1/hg19LggInv) (hg19LggInv) Hlaref Apr. 2012 (hlaRefV1/hlaRef1) (hlaRef1)
Hlaref Apr. 2012 (hlaRefV2/hlaRef2) (hlaRef2) Hlaref Apr. 2012
(hlaRefV3/hlaRef3) (hlaRef3) Hominidae Apr. 24. 2006 (UCSC Recon/homIni13)
(homIni13) Hominidae Oct. 1. 2006 (UCSC Recon/homIni14) (homIni14) Homo sapiens
(hg19 with mtDNA replaced with rCRS) (Homo_sapiens_nuHg19_mtrCRS) Homo sapiens
(hg19 with mtDNA replaced with rCRS, and containing pUC18 and phiX174)
(hg19_rCRS_pUC18_phiX174) Homo sapiens b37 (hg_g1k_v37) Homo sapiens
hydatidiform mole assembly chm1 June 2013 (1/CHM1) (CHM1) Honeybee (Apis
mellifera): apiMel3 (apiMel3) Horse Jan. 2007 (Broad/equCab1) (equCab1) Horse
Jan. 2018 (EquCab3.0/equCab3) (equCab3) Horse Sep. 2007 (Broad/equCab2)
(equCab2) Hpv Aug. 2002 (ViralProj15424/hpv1) (hpv1) Human ANGIE TEST Dec. 2013
(GRCh38/grcHhh38) (grcHhh38) Human ANGIE TEST Dec. 2017 (GRCh38.p12/grcH38P12)
(grcH38P12) Human ANGIE TEST Jun. 2017 (GRCh38.p11/grcH38P11) (grcH38P11) Human
Apr. 2003 (NCBI33/hg15) (hg15) Human CHM13 2.0 (T2T Consortium) Jan. 2022 Human
Dec. 2013 (GRCh38/hg38) (hg38) Human Feb. 2009 (GRCh37/hg19) (hg19) Human July
2003 (NCBI34/hg16) (hg16) Human Mar. 2006 (NCBI36/hg18) (hg18) Human May 2004
(NCBI35/hg17) (hg17) Human herpesvirus 1 (15217) Human repeats Nov. 2012
(1/repeats2) (repeats2) Hydra magnipapillata str. 105 (Hydra_JCVI) Hyperthermus
butylicus DSM 5456 (hypeButy1) Hyphomonas neptunium ATCC 15444
(hyphNept_ATCC15444) Idiomarina loihiensis L2TR (idioLoih_L2TR) Ignicoccus
hospitalis KIN4/I (13914) Indian false vampire Sep. 2013 (ASM46534v1/megLyr1)
(megLyr1) J. Craig Venter Sep. 2007 (HuRef/venter1) (venter1) Jannaschia sp.
CCS1 (jannCCS1) Janthinobacterium sp. Marseille (16549) Japanese quail 26
Jul-2013 (Coja_1.0/cotJap1) (cotJap1) Japanese quail Mar. 2016 (Coturnix
japonica 2.0/cotJap2) (cotJap2) Kangaroo rat Dec. 2014 (Dord_2.0/dipOrd2)
(dipOrd2) Kangaroo rat Jul. 2008 (Broad/dipOrd1) (dipOrd1) Killdeer Jun 2014
(ASM70802v1/chaVoc1) (chaVoc1) Killer whale Jan. 2013 (Oorc_1.1/orcOrc1)
(orcOrc1) Kineococcus radiotolerans SRS30216 (10689) Kirref Apr. 2011
(kirRef/kirRef) (kirRef) Kirrefv2 Apr. 2011 (kirRefV2/kirRefV2) (kirRefV2)
Kirrefv3 Apr. 2011 (kirRefV3/kirRefV3) (kirRefV3) Kirrefv4 Apr. 2011
(kirRefV4/kirRefV4) (kirRefV4) Kirrefv5 Apr. 2011 (kirRefV5/kirRefV5) (kirRefV5)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (31) Koala (Phascolarctos
cinereus): phaCin_unsw_v4.1 (GCF_002099425.1) Korean Man (Homo_sapiens_AK1)
Lactobacillus acidophilus NCFM (82) Lactobacillus brevis ATCC 367 (404)
Lactobacillus casei ATCC 334 (402) Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842 (16871) Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
(403) Lactobacillus gasseri ATCC 33323 (84) Lactobacillus helveticus DPC 4571
(17811) Lactobacillus johnsonii NCC 533 (9638) Lactobacillus plantarum WCFS1
(lactPlan) Lactobacillus reuteri F275 (15766) Lactobacillus sakei subsp. sakei
23K (13435) Lactobacillus salivarius UCC118 (lactSali_UCC118) Lactococcus lactis
subsp. cremoris MG1363 (18797) Lactococcus lactis subsp. cremoris SK11 (401)
Lactococcus lactis subsp. lactis Il1403 (lactLact) Lamprey Dec. 2017
(Pmar_germline 1.0/petMar3) (petMar3) Lamprey Mar. 2007 (WUGSC 3.0/petMar1)
(petMar1) Lamprey Sep. 2010 (WUGSC 7.0/petMar2) (petMar2) Lancelet Apr. 2008
(JGI v2.0/braFlo2) (braFlo2) Lancelet Mar. 2006 (JGI 1.0/braFlo1) (braFlo1)
Laurasiatheria Apr. 24. 2006 (UCSC Recon/lauRas13) (lauRas13) Lawsonia
intracellularis PHE/MN1-00 (lawsIntr_PHE_MN1_00) Legionella pneumophila str.
Corby (17491) Legionella pneumophila str. Lens (13126) Legionella pneumophila
str. Paris (13127) Legionella pneumophila subsp. pneumophila str. Philadelphia 1
(legiPneu_PHILADELPHIA) Leifsonia xyli subsp. xyli str. CTCB07
(leifXyli_XYLI_CTCB0) Leishmania major 2005 (lMaj5) Leptospira borgpetersenii
serovar Hardjo-bovis JB197 (16148) Leptospira borgpetersenii serovar
Hardjo-bovis L550 (16146) Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130 (10687) Leptospira interrogans serovar Lai str. 56601 (leptInte)
Leptothrix cholodnii SP-6 (20039) Lesser Egyptian jerboa May 2012
(JacJac1.0/jacJac1) (jacJac1) Leuconostoc citreum KM20 (16062) Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293 (leucMese_ATCC8293) Limpet Jul.
2013 (lotGig0/lotGig0) (lotGig0) Listeria innocua Clip11262 (listInno) Listeria
monocytogenes EGD-e (276) Listeria monocytogenes str. 4b F2365 (85) Listeria
welshimeri serovar 6b str. SLCC5334 (13443) Lizard Feb. 2007 (Broad/anoCar1)
(anoCar1) Lizard May 2010 (Broad AnoCar2.0/anoCar2) (anoCar2) Lysinibacillus
sphaericus C3-41 (19619) M. domestica 22 Apr 2013
(Musca_domestica-2.0.2/musDom2) (musDom2) M. hapla Sep. 2008 (M. hapla VW9
WS210/melHap1) (melHap1) M. incognita Feb. 2008 (M. incognita WS210/melInc1)
(melInc1) M. incognita Feb. 2008 (M. incognita WS245/PRJEA28837/melInc2)
(melInc2) MMTV Nov. 2009 (MMTV/mmtv) (mmtv) Ma's night monkey Jun. 2017
(Anan_2.0/aotNan1) (aotNan1) Magnetococcus sp. MC-1 (magnMC1) Magnetospirillum
magneticum AMB-1 (magnMagn_AMB_1) Maize (Zea mays) (Zea_mays_B73_RefGen_v2)
Malayan flying lemur Jun. 2014 (G_variegatus-3.0.2/galVar1) (galVar1) Mallard
duck Apr 2013 (BGI_duck_1.0/anaPla1) (anaPla1) Manatee Oct. 2011 (Broad
v1.0/triMan1) (triMan1) Mannheimia succiniciproducens MBEL55E (mannSucc_MBEL55E)
Marburg virus Sep. 2014 (NC_024781.1/marVir1) (marVir1) Maricaulis maris MCS10
(mariMari_MCS10) Marinobacter aquaeolei VT8 (mariAqua_VT8) Marinomonas sp. MWYL1
(17445) Marmoset June 2007 (WUGSC 2.0.2/calJac1) (calJac1) Marmoset March 2009
(WUGSC 3.2/calJac3) (calJac3) Medaka Apr. 2006 (NIG/UT MEDAKA1/oryLat1)
(oryLat1) Medaka Oct. 2005 (NIG/UT MEDAKA1/oryLat2) (oryLat2) Medium ground
finch Apr. 2012 (GeoFor_1.0/geoFor1) (geoFor1) Megabat Jul. 2008 (Broad/pteVam1)
(pteVam1) Mesoplasma florum L1 (mesoFlor_L1) Mesorhizobium loti MAFF303099
(mesoLoti) Mesorhizobium sp. BNC1 (10690) Metallosphaera sedula DSM 5348
(metaSedu) Methanobrevibacter smithii ATCC 35061 (methSmit1) Methanocaldococcus
jannaschii DSM 2661 (methJann1) Methanococcoides burtonii DSM 6242 (methBurt2)
Methanococcus aeolicus Nankai-3 (methAeol1) Methanococcus maripaludis C5
(methMari_C5_1) Methanococcus maripaludis C6 (19639) Methanococcus maripaludis
C7 (methMari_C7) Methanococcus maripaludis S2 (metMar1) Methanococcus vannielii
SB (methVann1) Methanocorpusculum labreanum Z (methLabrZ_1) Methanoculleus
marisnigri JR1 (mculMari1) Methanopyrus kandleri AV19 (methKand1) Methanosaeta
thermophila PT (methTherPT1) Methanosarcina acetivorans C2A (metAce1)
Methanosarcina barkeri str. Fusaro (methBark1) Methanosarcina mazei Go1
(methMaze1) Methanosphaera stadtmanae DSM 3091 (methStad1) Methanospirillum
hungatei JF-1 (methHung1) Methanothermobacter thermautotrophicus str. Delta H
(methTher1) Methylibium petroleiphilum PM1 (methPetr_PM1) Methylobacillus
flagellatus KT (methFlag_KT) Methylobacterium extorquens PA1 (18637)
Methylobacterium radiotolerans JCM 2831 (18817) Methylobacterium sp. 4-46
(18809) Methylococcus capsulatus str. Bath (methCaps_BATH) Mexican tetra
(cavefish) Apr 2013 (Astyanax_mexicanus-1.0.2/astMex1) (astMex1) Mhcref Apr.
2011 (mhcRefnoNsV2/mhcRefnoNs2) (mhcRefnoNs2) Mhcref Jan. 2011 (mhcRefV1/mhcRef)
(mhcRef) Mhcref July 2011 (mhcRefnoNsV10/mhcRefnoNs10) (mhcRefnoNs10) Mhcref
July 2011 (mhcRefnoNsV11/mhcRefnoNs11) (mhcRefnoNs11) Mhcref July 2011
(mhcRefnoNsV12/mhcRefnoNs12) (mhcRefnoNs12) Mhcref July 2011
(mhcRefnoNsV13/mhcRefnoNs13) (mhcRefnoNs13) Mhcref July 2011
(mhcRefnoNsV14/mhcRefnoNs14) (mhcRefnoNs14) Mhcref July 2011
(mhcRefnoNsV15/mhcRefnoNs15) (mhcRefnoNs15) Mhcref July 2011
(mhcRefnoNsV16/mhcRefnoNs16) (mhcRefnoNs16) Mhcref July 2011
(mhcRefnoNsV17/mhcRefnoNs17) (mhcRefnoNs17) Mhcref July 2011
(mhcRefnoNsV5/mhcRefnoNs5) (mhcRefnoNs5) Mhcref July 2011
(mhcRefnoNsV6/mhcRefnoNs6) (mhcRefnoNs6) Mhcref July 2011
(mhcRefnoNsV7/mhcRefnoNs7) (mhcRefnoNs7) Mhcref July 2011
(mhcRefnoNsV8/mhcRefnoNs8) (mhcRefnoNs8) Mhcref July 2011
(mhcRefnoNsV8/mhcRefnoNs9) (mhcRefnoNs9) Mhcref June 2011
(mhcRefnoNsV1/mhcRefnoNs) (mhcRefnoNs) Mhcref June 2011
(mhcRefnoNsV3/mhcRefnoNs3) (mhcRefnoNs3) Mhcref June 2011
(mhcRefnoNsV4/mhcRefnoNs4) (mhcRefnoNs4) Mhcref Mar. 2012
(mhcRefnoNsV22/mhcRefnoNs22) (mhcRefnoNs22) Mhcref Mar. 2012
(mhcRefnoNsV23/mhcRefnoNs23) (mhcRefnoNs23) Mhcref Mar. 2012
(mhcRefnoNsV24/mhcRefnoNs24) (mhcRefnoNs24) Mhcref Oct. 2011
(mhcRefnoNsV18/mhcRefnoNs18) (mhcRefnoNs18) Mhcref Oct. 2011
(mhcRefnoNsV19/mhcRefnoNs19) (mhcRefnoNs19) Mhcref Oct. 2011
(mhcRefnoNsV20/mhcRefnoNs20) (mhcRefnoNs20) Mhcref Oct. 2011
(mhcRefnoNsV21/mhcRefnoNs21) (mhcRefnoNs21) Microbat Jul. 2010 (Broad Institute
Myoluc2.0/myoLuc2) (myoLuc2) Microbat Mar. 2006 (Broad/myoLuc1) (myoLuc1)
Microcystis aeruginosa NIES-843 (27835) Microworm Feb. 2013
(WS240/Pred3/panRed1) (panRed1) Minke whale Oct. 2013 (BalAcu1.0/balAcu1)
(balAcu1) Mm10haps Dec. 2011 (Mouse strains/mm10Strains1) (mm10Strains1)
Moorella thermoacetica ATCC 39073 (moorTher_ATCC39073) Mosquito (Aedes aegypti)
(AaegL1) Mosquito (Anopheles gambiae) (AgamP3) Mosquito (Culex quinquefasciatus)
(CpipJ1) Mouse Aug. 2005 (NCBI35/mm7) (mm7) Mouse Aug. 2018 (GRCm38B/GRCm38B)
(GRCm38B) Mouse Dec. 2011 (GRCm38/mm10) (mm10) Mouse Feb. 2006 (NCBI36/mm8)
(mm8) Mouse July 2007 (NCBI37/mm9) (mm9) Mouse May 2004 (mm5) Mouse lemur Feb.
2017 (Mmur_3.0/micMur3) (micMur3) Mouse lemur Jul. 2007 (Broad/micMur1)
(micMur1) Mouse lemur May 2015 (Mouse lemur/micMur2) (micMur2) Mycobacterium
abscessus (15691) Mycobacterium avium 104 (88) Mycobacterium avium subsp.
paratuberculosis K-10 (91) Mycobacterium bovis AF2122/97 (89) Mycobacterium
bovis BCG str. Pasteur 1173P2 (18059) Mycobacterium gilvum PYR-GCK (15760)
Mycobacterium leprae TN (90) Mycobacterium smegmatis str. MC2 155 (92)
Mycobacterium sp. JLS (16079) Mycobacterium sp. KMS (16081) Mycobacterium sp.
MCS (15762) Mycobacterium tuberculosis CDC1551 (223) Mycobacterium tuberculosis
F11 (15642) Mycobacterium tuberculosis H37Ra (18883) Mycobacterium tuberculosis
H37Rv (mycoTube_H37RV) Mycobacterium ulcerans Agy99 (16230) Mycobacterium
vanbaalenii PYR-1 (15761) Mycoplasma agalactiae PG2 (16095) Mycoplasma
capricolum subsp. capricolum ATCC 27343 (16208) Mycoplasma gallisepticum R (409)
Mycoplasma genitalium G37 (mycoGeni) Mycoplasma hyopneumoniae 232 (13120)
Mycoplasma hyopneumoniae 7448 (10639) Mycoplasma hyopneumoniae J (10675)
Mycoplasma mobile 163K (10697) Mycoplasma mycoides subsp. mycoides SC str. PG1
(10616) Mycoplasma penetrans HF-2 (176) Mycoplasma pneumoniae M129 (99)
Mycoplasma pulmonis UAB CTIP (100) Mycoplasma synoviae 53 (10676) Myxococcus
xanthus DK 1622 (myxoXant_DK_1622) N. americanus Dec. 2013
(WS242/N_americanus_v1/necAme1) (necAme1) Naked mole-rat Jan. 2012 (Broad
HetGla_female_1.0/hetGla2) (hetGla2) Naked mole-rat Jul. 2011 (BGI
HetGla_1.0/hetGla1) (hetGla1) Nanoarchaeum equitans Kin4-M (nanEqu1)
Natronomonas pharaonis DSM 2160 (natrPhar1) Neisseria gonorrhoeae FA 1090
(neisGono_FA1090_1) Neisseria meningitidis 053442 (16393) Neisseria meningitidis
FAM18 (neisMeni_FAM18_1) Neisseria meningitidis MC58 (neisMeni_MC58_1) Neisseria
meningitidis Z2491 (neisMeni_Z2491_1) Neorickettsia sennetsu str. Miyayama
(neorSenn_MIYAYAMA) Nile tilapia Jan. 2011 (Broad oreNil1.0/oreNil1) (oreNil1)
Nile tilapia Jan. 2011 (Broad oreNil1.1/oreNil2) (oreNil2) Nile tilapia Nov.
2016 (ASM185804v2/oreNil3) (oreNil3) Nitratiruptor sp. SB155-2 (18963)
Nitrobacter hamburgensis X14 (13473) Nitrobacter winogradskyi Nb-255
(nitrWino_NB_255) Nitrosococcus oceani ATCC 19707 (nitrOcea_ATCC19707)
Nitrosomonas europaea ATCC 19718 (nitrEuro) Nitrosomonas eutropha C91 (13913)
Nitrosopumilus maritimus SCM1 (19265) Nitrosospira multiformis ATCC 25196
(nitrMult_ATCC25196) Nocardia farcinica IFM 10152 (nocaFarc_IFM10152)
Nocardioides sp. JS614 (nocaJS61) Non-Afrotheria Apr. 24. 2006 (UCSC
Recon/nonAfr13) (nonAfr13) Northern pike Jul 2014 (EsoLuc1.0/esoLuc1) (esoLuc1)
Nostoc sp. PCC 7120 (nostSp) Notfound PATCH Jun. 2013 (GRCh37.p13/grcH37P13)
(grcH37P13) Notyet Oct. 2011 (notYet1/calMil0) (calMil0) Novosphingobium
aromaticivorans DSM 12444 (novoArom_DSM12444) O. volvulus Nov. 2013
(WS241/O_volvulus_Cameroon_v3/oncVol1) (oncVol1) Oceanobacillus iheyensis HTE831
(oceaIhey) Ochrobactrum anthropi ATCC 49188 (19485) Oenococcus oeni PSU-1
(oenoOeni_PSU_1) Onion yellows phytoplasma OY-M (onioYell_PHYTOPLASMA) Opossum
Jan. 2006 (Broad/monDom4) (monDom4) Opossum Oct. 2004 (Broad prelim/monDom1)
(monDom1) Opossum Oct. 2006 (Broad/monDom5) (monDom5) Orangutan Jan. 2018
(Susie_PABv2/ponAbe3) (ponAbe3) Orangutan July 2007 (WUGSC 2.0.2/ponAbe2)
(ponAbe2) Orientia tsutsugamushi str. Boryong (orieTsut_BORYONG) Oxytricha
trifallax Sep. 2015 (WashU ASM129792v1/oxyTri2) (oxyTri2) P. exspectatus Mar.
2014 (WS243/P_exspectatus_v1/priExs1) (priExs1) P. falciparum Plasmodium
falciparum (?/falciparum) (falciparum) P. pacificus Aug. 2014
(WS221/P_pacificus-v2/priPac3) (priPac3) P. pacificus Dec. 2008 (WUGSC
5.0.1/priPac2) (priPac2) P. pacificus Feb. 2007 (WUGSC 5.0/priPac1) (priPac1)
Pacific walrus Jan 2013 (Oros_1.0/odoRosDiv1) (odoRosDiv1) Painted turtle Dec.
2011 (v3.0.1/chrPic1) (chrPic1) Painted turtle Mar. 2014 (v3.0.3/chrPic2)
(chrPic2) Panda Dec. 2009 (BGI-Shenzhen 1.0/ailMel1) (ailMel1) Parabacteroides
distasonis ATCC 8503 (13485) Paracoccus denitrificans PD1222 (paraDeni_PD1222)
Parnell's mustached bat Sep. 2013 (ASM46540v1/ptePar1) (ptePar1) Parrot Jan.
2013 (AV1/amaVit1) (amaVit1) Parvibaculum lavamentivorans DS-1 (17639)
Pasteurella multocida subsp. multocida str. Pm70 (pastMult) Pectobacterium
atrosepticum SCRI1043 (erwiCaro_ATROSEPTICA) Pediococcus pentosaceus ATCC 25745
(pediPent_ATCC25745) Pelobacter carbinolicus DSM 2380 (peloCarb) Pelobacter
propionicus DSM 2379 (13384) Pelodictyon luteolum DSM 273 (peloLute_DSM273)
Pelotomaculum thermopropionicum SI (peloTher_SI) Petrotoga mobilis SJ95 (17679)
Photobacterium profundum SS9 (photProf_SS9) Photorhabdus luminescens subsp.
laumondii TTO1 (photLumi) Picrophilus torridus DSM 9790 (picrTorr1) Pig Apr.
2009 (SGSC 9.53/susScr1) (susScr1) Pig Aug. 2011 (SGSC Sscrofa10.2/susScr3)
(susScr3) Pig Feb. 2017 (Sscrofa11.1/susScr11) (susScr11) Pig May 2010
(Sscrofa9.58) Pig Nov. 2009 (SGSC Sscrofa9.2/susScr2) (susScr2) Pig roundworm
Sep. 2012 (WS229/AscSuum_1.0/ascSuu1) (ascSuu1) Pig-tailed macaque Mar. 2015
(Mnem_1.0/macNem1) (macNem1) Pika Jul. 2008 (Broad/ochPri2) (ochPri2) Pika May
2012 (OchPri3.0/ochPri3) (ochPri3) Pine wood nematode Nov. 2011 (WS229/B.
xylophilus Ka4C1/burXyl1) (burXyl1) Plasmodium falciparum 3d7 10 Sept 2014
(V12.0/plasFalc3D7V12) (plasFalc3D7V12) Platypus Feb. 2007 (ASM227v2/ornAna2)
(ornAna2) Platypus Mar. 2007 (WUGSC 5.0.1/ornAna1) (ornAna1) Polar bear 09
May-2014 (UrsMar_1.0/ursMar1) (ursMar1) Polaromonas naphthalenivorans CJ2
(13418) Polaromonas sp. JS666 (polaJS66) Polynucleobacter sp. QLW-P1DMWA-1
(polyQLWP) Poplar (Populus trichocarpa) (Ptrichocarpa_156) Porphyromonas
gingivalis W83 (porpGing_W83) Prairie deer mouse Dec. 2013 (Pman_1.0/perManBai1)
(perManBai1) Prairie vole Oct. 2012 (MicOch1.0/micOch1) (micOch1) Primate Apr.
24. 2006 (UCSC Recon/priMat13) (priMat13) Princess of Burundi May 2011
(NeoBri1.0/neoBri1) (neoBri1) Proboscis monkey Nov. 2014 (Charlie1.0/nasLar1)
(nasLar1) Prochlorococcus marinus str. AS9601 (13548) Prochlorococcus marinus
str. MIT 9211 (13551) Prochlorococcus marinus str. MIT 9215 (18633)
Prochlorococcus marinus str. MIT 9301 (15746) Prochlorococcus marinus str. MIT
9303 (13496) Prochlorococcus marinus str. MIT 9312 (13910) Prochlorococcus
marinus str. MIT 9313 (220) Prochlorococcus marinus str. MIT 9515 (13617)
Prochlorococcus marinus str. NATL1A (15660) Prochlorococcus marinus str. NATL2A
(13911) Prochlorococcus marinus subsp. marinus str. CCMP1375 (procMari_CCMP1375)
Prochlorococcus marinus subsp. pastoris str. CCMP1986 (213) Propionibacterium
acnes KPA171202 (propAcne_KPA171202) Prosthecochloris vibrioformis DSM 265
(12607) Przewalski horse Jun 2014 (Burgud/equPrz1) (equPrz1) Pseudoalteromonas
atlantica T6c (13454) Pseudoalteromonas haloplanktis TAC125 (pseuHalo_TAC125)
Pseudomonas aeruginosa PA7 (16720) Pseudomonas aeruginosa PAO1 (pseuAeru)
Pseudomonas aeruginosa UCBPP-PA14 (386) Pseudomonas entomophila L48 (16800)
Pseudomonas fluorescens Pf-5 (327) Pseudomonas fluorescens PfO-1 (12)
Pseudomonas mendocina ymp (17457) Pseudomonas putida F1 (13909) Pseudomonas
putida GB-1 (17629) Pseudomonas putida KT2440 (267) Pseudomonas putida W619
(17053) Pseudomonas stutzeri A1501 (16817) Pseudomonas syringae pv. phaseolicola
1448A (12416) Pseudomonas syringae pv. syringae B728a (323) Pseudomonas syringae
pv. tomato str. DC3000 (359) Psychrobacter arcticus 273-4 (psycArct_273_4)
Psychrobacter cryohalolentis K5 (13920) Psychrobacter sp. PRwf-1 (15759)
Psychromonas ingrahamii 37 (psycIngr_37) Pundamilia nyererei Oct 2011
(PunNye1.0/punNye1) (punNye1) Purple Sea Urchin (Strongylocentrotus purpuratus)
v2.6 (Spur_v2.6) Pyrobaculum aerophilum str. IM2 (pyrAer1) Pyrobaculum
arsenaticum DSM 13514 (pyroArse1) Pyrobaculum calidifontis JCM 11548 (pyroCali1)
Pyrobaculum islandicum DSM 4184 (pyroIsla1) Pyrococcus abyssi GE5 (pyrAby1)
Pyrococcus furiosus DSM 3638 (pyrFur2) Pyrococcus horikoshii OT3 (pyrHor1)
Rabbit Apr. 2009 (Broad/oryCun2) (oryCun2) Rabbit May 2005 (Broad/oryCun1)
(oryCun1) Ralstonia eutropha H16 (13603) Ralstonia eutropha JMP134
(ralsEutr_JMP134) Ralstonia metallidurans CH34 (250) Ralstonia solanacearum
GMI1000 (ralsSola) Rat Jul. 2014 (RGSC 6.0/rn6) (rn6) Rat June 2003 (Baylor
3.1/rn3) (rn3) Rat Mar. 2012 (RGSC 5.0/rn5) (rn5) Rat May. 2019 (Regen
Rn0/regenRn0) (regenRn0) Rat Nov. 2004 (Baylor 3.4/rn4) (rn4) Red Flour Beetle
(Tribolium castaneum) (Tcas_3.0) Renibacterium salmoninarum ATCC 33209 (19227)
RepBase Jun. 2012 (hg19/repBase0) (repBase0) RepBase Sep. 2012 (17.08/repBase1)
(repBase1) Reston ebolavirus Aug. 2014 (NC_004161.1/resEbo1) (resEbo1) Rhesus
Feb. 2019 (Mmul_10/rheMac10) (rheMac10) Rhesus Jan. 2006 (MGSC Merged
1.0/rheMac2) (rheMac2) Rhesus Nov. 2014 (UMD MacaM_Assembly_v7/rheMac7)
(rheMac7) Rhesus Nov. 2015 (BCM Mmul_8.0.1/rheMac8) (rheMac8) Rhesus Oct. 2010
(BGI CR_1.0/rheMac3) (rheMac3) Rhizobium etli CFN 42 (rhizEtli_CFN_42) Rhizobium
leguminosarum bv. viciae 3841 (344) Rhodobacter sphaeroides 2.4.1
(rhodSpha_2_4_1) Rhodobacter sphaeroides ATCC 17025 (15755) Rhodobacter
sphaeroides ATCC 17029 (15754) Rhodococcus sp. RHA1 (rhodRHA1) Rhodoferax
ferrireducens T118 (13908) Rhodopirellula baltica SH 1 (pireSp) Rhodopseudomonas
palustris BisA53 (15751) Rhodopseudomonas palustris BisB18 (15750)
Rhodopseudomonas palustris BisB5 (15749) Rhodopseudomonas palustris CGA009
(rhodPalu_CGA009) Rhodopseudomonas palustris HaA2 (15747) Rhodospirillum rubrum
ATCC 11170 (rhodRubr_ATCC11170) Rice (Oryza sativa ssp. japonica var.
Nipponbare) (oryza_sativa_japonica_nipponbare_IRGSP4.0) Rickettsia akari str.
Hartford (12953) Rickettsia bellii OSU 85-389 (17237) Rickettsia bellii RML369-C
(rickBell_RML369_C) Rickettsia canadensis str. McKiel (12952) Rickettsia conorii
str. Malish 7 (42) Rickettsia felis URRWXCal2 (13884) Rickettsia massiliae MTU5
(18271) Rickettsia prowazekii str. Madrid E (43) Rickettsia rickettsii str.
'Sheila Smith' (9636) Rickettsia rickettsii str. Iowa (19943) Rickettsia typhi
str. Wilmington (10679) Rock hyrax Jul. 2008 (Broad/proCap1) (proCap1) Rock
pigeon Feb 2013 (Cliv_1.0/colLiv1) (colLiv1) Rodent Apr. 24. 2006 (UCSC
Recon/rodEnt13) (rodEnt13) Roseiflexus castenholzii DSM 13941 (13462)
Roseiflexus sp. RS-1 (16190) Roseobacter denitrificans OCh 114
(roseDeni_OCH_114) Rubrobacter xylanophilus DSM 9941 (rubrXyla_DSM9941) S.
cerevisae str. S288C (Saccharomyces_cerevisiae_S288C_SGD2010) S. cerevisiae Apr.
2011 (SacCer_Apr2011/sacCer3) (sacCer3) S. cerevisiae June 2008 (SGD/sacCer2)
(sacCer2) S. cerevisiae Oct. 2003 (SGD/sacCer1) (sacCer1) S. purpuratus Apr.
2005 (Baylor 1.1/strPur1) (strPur1) S. purpuratus Feb. 2009 (BCM-HGSC
Spur_v2.5/strPur3) (strPur3) S. purpuratus Jun. 2011 (BCM-HGSC
Spur_v3.1/strPur4) (strPur4) S. purpuratus Sep. 2006 (Baylor 2.1/strPur2)
(strPur2) SARS coronavirus Apr. 2003 (GenBank Apr. 14 '03/sc1) (sc1)
Saccharophagus degradans 2-40 (saccDegr_2_40) Saccharopolyspora erythraea NRRL
2338 (saccEryt_NRRL_2338) Saker falcon Feb 2013 (F_cherrug_v1.0/falChe1)
(falChe1) Salinibacter ruber DSM 13855 (saliRube_DSM13855) Salinispora arenicola
CNS-205 (17109) Salinispora tropica CNB-440 (saliTrop_CNB_440) Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- (13030) Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67 (9618) Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150 (salmEnte_PARATYPI_ATC) Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7 (27803) Salmonella
enterica subsp. enterica serovar Typhi str. CT18 (salmTyph) Salmonella enterica
subsp. enterica serovar Typhi str. Ty2 (salmTyph_TY2) Salmonella typhimurium LT2
(241) Saltwater crocodile June 2011 (UCSC cPoro_v0.1c45/croPor0) (croPor0)
Scarlet macaw Jun 2013 (SMACv1.1/araMac1) (araMac1) Sclater's lemur Aug. 2015
(Eflavifronsk33QCA/eulFla1) (eulFla1) Sea hare Jul. 2013 (aplCal0/aplCal0)
(aplCal0) Sea hare Sept. 2008 (Broad 2.0/aplCal1) (aplCal1) Serratia
proteamaculans 568 (17459) Sheep Aug. 2012 (ISGC Oar_v3.1/oviAri3) (oviAri3)
Sheep Feb. 2010 (ISGC Ovis_aries_1.0/oviAri1) (oviAri1) Sheep Nov. 2015
(Oar_v4.0/oviAri4) (oviAri4) Sheepshead minnow Jul 2014
(C_variegatus-1.0/cypVar1) (cypVar1) Shewanella amazonensis SB2B (shewAmaz)
Shewanella baltica OS155 (shewBalt) Shewanella baltica OS185 (17643) Shewanella
baltica OS195 (13389) Shewanella denitrificans OS217 (shewDeni) Shewanella
frigidimarina NCIMB 400 (shewFrig) Shewanella halifaxensis HAW-EB4 (20241)
Shewanella loihica PV-4 (shewLoihPV4) Shewanella oneidensis MR-1 (shewOnei)
Shewanella pealeana ATCC 700345 (17415) Shewanella putrefaciens CN-32
(shewPutrCN32) Shewanella sediminis HAW-EB3 (18789) Shewanella sp. ANA-3
(shewANA3) Shewanella sp. MR-4 (shewMR4) Shewanella sp. MR-7 (shewMR7)
Shewanella sp. W3-18-1 (shewW318) Shewanella woodyi ATCC 51908 (17455) Shigella
boydii Sb227 (13146) Shigella dysenteriae Sd197 (13145) Shigella flexneri 2a
str. 2457T (408) Shigella flexneri 2a str. 301 (shigFlex_2A) Shigella flexneri 5
str. 8401 (16375) Shigella sonnei Ss046 (13151) Shrew Aug. 2008 (Broad/sorAra2)
(sorAra2) Shrew June 2006 (Broad/sorAra1) (sorAra1) Silicibacter pomeroyi DSS-3
(siliPome_DSS_3) Silicibacter sp. TM1040 (13040) Silkworm (Bombyx_mori_p50T_2.0)
Simhumanmammal Oct. 2011 (simHumanMammal/simHumanMammal) (simHumanMammal) Simmam
Jan. 2011 (SimMamV1/simHumanMam) (simHumanMam) Simprim Jan. 2011
(SimPrimV1/simHumanPrim) (simHumanPrim) Simrefmam Jan. 2011
(SimRefMamV1/simRefMam) (simRefMam) Sinorhizobium medicae WSM419 (16304)
Sinorhizobium meliloti 1021 (sinoMeli) Sloth Jul. 2008 (Broad/choHof1) (choHof1)
Snail Jun. 2013 (bioGla0/bioGla0) (bioGla0) Sodalis glossinidius str.
'morsitans' (sodaGlos_MORSITANS) Solibacter usitatus Ellin6076
(soliUsit_ELLIN6076) Sooty mangabey Mar. 2015 (Caty_1.0/cerAty1) (cerAty1)
Sorangium cellulosum 'So ce 56' (28111) Southern platyfish Jan 2012
(Xiphophorus_maculatus-4.4.2/xipMac1) (xipMac1) Sperm whale Sep. 2013
(Physeter_macrocephalus-2.0.2/phyCat1) (phyCat1) Sphingomonas wittichii RW1
(17343) Sphingopyxis alaskensis RB2256 (sphiAlas_RB2256) Spiny softshell turtle
May 2013 (ASM38561v1/apaSpi1) (apaSpi1) Spotted gar Dec 2011 (LepOcu1/lepOcu1)
(lepOcu1) Squirrel Feb. 2008 (Broad/speTri1) (speTri1) Squirrel Nov. 2011
(Broad/speTri2) (speTri2) Squirrel monkey Oct. 2011 (Broad/saiBol1) (saiBol1)
Staph Feb. 2006 (ASM1342v1/staAur1) (staAur1) Staph Feb. 2006
(USA300_FPR3757/staAur2) (staAur2) Staphylococcus aureus RF122 (63)
Staphylococcus aureus subsp. aureus COL (238) Staphylococcus aureus subsp.
aureus JH1 (15758) Staphylococcus aureus subsp. aureus JH9 (15757)
Staphylococcus aureus subsp. aureus MRSA252 (265) Staphylococcus aureus subsp.
aureus MSSA476 (266) Staphylococcus aureus subsp. aureus MW2 (306)
Staphylococcus aureus subsp. aureus Mu3 (18509) Staphylococcus aureus subsp.
aureus Mu50 (stapAure_MU50) Staphylococcus aureus subsp. aureus N315 (264)
Staphylococcus aureus subsp. aureus NCTC 8325 (237) Staphylococcus aureus subsp.
aureus USA300 (16313) Staphylococcus aureus subsp. aureus USA300_TCH1516 (19489)
Staphylococcus aureus subsp. aureus str. Newman (18801) Staphylococcus
epidermidis ATCC 12228 (279) Staphylococcus epidermidis RP62A (64)
Staphylococcus haemolyticus JCSC1435 (12508) Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305 (15596) Staphylothermus marinus F1 (stapMari1)
Star-nosed mole Mar 2012 (ConCri1.0/conCri1) (conCri1) Starlet sea anemone Jun.
2007 (JGI-PDF/nemVec1) (nemVec1) Stickleback Feb. 2006 (Broad/gasAcu1) (gasAcu1)
Straw colored fruit bat 13 Sep 2013 (ASM46528v1/eidHel1) (eidHel1) Streptococcus
agalactiae 2603V/R (330) Streptococcus agalactiae A909 (326) Streptococcus
agalactiae NEM316 (334) Streptococcus gordonii str. Challis substr. CH1 (66)
Streptococcus mutans UA159 (333) Streptococcus pneumoniae D39 (16374)
Streptococcus pneumoniae Hungary19A-6 (28035) Streptococcus pneumoniae R6 (278)
Streptococcus pneumoniae TIGR4 (277) Streptococcus pyogenes M1 GAS
(strePyog_M1_GAS) Streptococcus pyogenes MGAS10270 (16364) Streptococcus
pyogenes MGAS10394 (12469) Streptococcus pyogenes MGAS10750 (16366)
Streptococcus pyogenes MGAS2096 (16365) Streptococcus pyogenes MGAS315 (311)
Streptococcus pyogenes MGAS5005 (13888) Streptococcus pyogenes MGAS6180 (13887)
Streptococcus pyogenes MGAS8232 (286) Streptococcus pyogenes MGAS9429 (16363)
Streptococcus pyogenes SSI-1 (301) Streptococcus pyogenes str. Manfredo (270)
Streptococcus sanguinis SK36 (13942) Streptococcus suis 05ZYH33 (17153)
Streptococcus suis 98HAH33 (17155) Streptococcus thermophilus CNRZ1066 (13163)
Streptococcus thermophilus LMD-9 (13773) Streptococcus thermophilus LMG 18311
(13162) Streptomyces avermitilis MA-4680 (189) Streptomyces coelicolor A3(2)
(streCoel) Sudan ebolavirus Aug. 2014 (NC_006432.1/sudEbo1) (sudEbo1) Sulfolobus
acidocaldarius DSM 639 (sulfAcid1) Sulfolobus solfataricus P2 (sulSol1)
Sulfolobus tokodaii str. 7 (sulfToko1) Sulfurimonas denitrificans DSM 1251
(thioDeni_ATCC33889) Sulfurovum sp. NBC37-1 (18965) Symbiobacterium thermophilum
IAM 14863 (symbTher_IAM14863) Synechococcus elongatus PCC 6301 (13282)
Synechococcus elongatus PCC 7942 (10645) Synechococcus sp. CC9311 (12530)
Synechococcus sp. CC9605 (13643) Synechococcus sp. CC9902 (13655) Synechococcus
sp. JA-2-3B'a(2-13) (16252) Synechococcus sp. JA-3-3Ab (16251) Synechococcus sp.
PCC 7002 (28247) Synechococcus sp. RCC307 (13654) Synechococcus sp. WH 7803
(13642) Synechococcus sp. WH 8102 (syneSp_WH8102) Synechocystis sp. PCC 6803
(synePCC6) Syntrophobacter fumaroxidans MPOB (syntFuma_MPOB) Syntrophomonas
wolfei subsp. wolfei str. Goettingen (syntWolf_GOETTINGEN) Syntrophus
aciditrophicus SB (syntAcid_SB) T. castaneum Sep. 2005 (Baylor 2.0/triCas2)
(triCas2) Tai forest ebolavirus Aug. 2014 (NC_014372.1/taiEbo1) (taiEbo1)
Tarsier Aug. 2008 (Broad/tarSyr1) (tarSyr1) Tarsier Sep. 2013
(Tarsius_syrichta-2.0.1/tarSyr2) (tarSyr2) Tasmanian devil Feb. 2011 (WTSI
Devil_ref v7.0/sarHar1) (sarHar1) Tenrec July 2005 (Broad/echTel1) (echTel1)
Tenrec Nov. 2012 (Broad/echTel2) (echTel2) Tetraodon Feb. 2004 (Genoscope
7/tetNig1) (tetNig1) Tetraodon Mar. 2007 (Genoscope 8.0/tetNig2) (tetNig2)
Theobroma cacao Dec 2010 (CIRAD/Theobroma cacao Belizian Criollo) (Tcacao_1.0)
Thermoanaerobacter pseudethanolicus ATCC 33223 (13901) Thermoanaerobacter sp.
X514 (16394) Thermoanaerobacter tengcongensis MB4 (therTeng) Thermobifida fusca
YX (therFusc_YX) Thermococcus kodakarensis KOD1 (therKoda1) Thermofilum pendens
Hrk 5 (therPend1) Thermoplasma acidophilum DSM 1728 (therAcid1) Thermoplasma
volcanium GSS1 (therVolc1) Thermosipho melanesiensis BI429 (17249)
Thermosynechococcus elongatus BP-1 (therElon) Thermotoga lettingae TMO (15644)
Thermotoga maritima MSB8 (therMari) Thermotoga petrophila RKU-1 (therPetr_RKU_1)
Thermotoga sp. RQ2 (19543) Thermus thermophilus HB27 (therTher_HB27) Thermus
thermophilus HB8 (therTher_HB8) Thiobacillus denitrificans ATCC 25259
(thioDeni_ATCC25259) Thiomicrospira crunogena XCL-2 (thioCrun_XCL_2) Threadworm
Apr. 2011 (WS226/S. ratti ED321/strRat1) (strRat1) Threadworm Sep. 2014 (S.
ratti ED321/strRat2) (strRat2) Tibetan antelope May 2013 (PHO1.0/panHod1)
(panHod1) Tibetan frog Mar. 2015 (BGI_ZX_2015/nanPar1) (nanPar1) Tibetan ground
jay Jan 2013 (PseHum1.0/pseHum1) (pseHum1) Tiger rockfish 22 Oct-2013
(Snig1.0/sebNig1) (sebNig1) Tongue sole 28 Jan-2014 (Cse_v1.0/cynSem1) (cynSem1)
Tree shrew Dec. 2006 (Broad/tupBel1) (tupBel1) Treponema denticola ATCC 35405
(4) Treponema pallidum subsp. pallidum str. Nichols (trepPall) Trichinella Jan.
2011 (WS225/Trichinella_spiralis-3.7.1/triSpi1) (triSpi1) Trichodesmium
erythraeum IMS101 (tricEryt_IMS101) Tropheryma whipplei TW08/27
(tropWhip_TW08_27) Tropheryma whipplei str. Twist (95) Turkey Dec. 2009 (TGC
Turkey_2.01/melGal1) (melGal1) Turkey Nov. 2014 (Turkey_5.0/melGal5) (melGal5)
Upper Galilee mountains blind mole rat Jun 2014 (S.galili_v1.0/nanGal1)
(nanGal1) Ureaplasma parvum serovar 3 str. ATCC 27815 (19087) Ureaplasma parvum
serovar 3 str. ATCC 700970 (ureaUrea) Verminephrobacter eiseniae EF01-2
(vermEise_EF01_2) Vibrio cholerae O1 biovar eltor str. N16961 (vibrChol1) Vibrio
cholerae O395 (vibrChol_O395_1) Vibrio fischeri ES114 (vibrFisc_ES114_1) Vibrio
harveyi ATCC BAA-1116 (19857) Vibrio parahaemolyticus RIMD 2210633 (vibrPara1)
Vibrio vulnificus CMCP6 (vibrVuln_CMCP6_1) Vibrio vulnificus YJ016
(vibrVuln_YJ016_1) Wallaby Nov. 2007 (Baylor 1.0/macEug1) (macEug1) Wallaby Sep.
2009 (TWGS Meug_1.1/macEug2) (macEug2) Water buffalo Sep. 2013
(UMD_CASPUR_WB_2.0/bubBub1) (bubBub1) Weddell seal Mar 2013 (LepWed1.0/lepWed1)
(lepWed1) Whipworm Jul. 2014 (WS243/T. suis DCEP-RM93M male/triSui1) (triSui1)
White rhinoceros May 2012 (CerSimSim1.0/cerSim1) (cerSim1) White throated
tinamou Jun 2014 (ASM70537v1/tinGut1) (tinGut1) White-faced sapajou Apr. 2016
(Cebus_imitator-1.0/cebCap1) (cebCap1) White-throated sparrow Apr 2013
(ASM38545v1/zonAlb1) (zonAlb1) Wigglesworthia glossinidia endosymbiont of
Glossina brevipalpis (wiggBrev) Wild yak Oct 2011 (BosGru_v2.0/bosMut1)
(bosMut1) Wolbachia endosymbiont of Drosophila melanogaster
(wolbEndo_OF_DROSOPHIL) Wolbachia endosymbiont strain TRS of Brugia malayi
(12475) Wolinella succinogenes DSM 1740 (woliSucc) X. tropicalis Aug. 2005 (JGI
4.1/xenTro2) (xenTro2) X. tropicalis Jul. 2016 (Xenopus_tropicalis_v9.1/xenTro9)
(xenTro9) X. tropicalis Nov. 2009 (JGI 4.2/xenTro3) (xenTro3) X. tropicalis Oct.
2004 (JGI 3.0/xenTro1) (xenTro1) X. tropicalis Sep. 2012 (JGI 7.0/xenTro7)
(xenTro7) Xanthobacter autotrophicus Py2 (15756) Xanthomonas axonopodis pv.
citri str. 306 (297) Xanthomonas campestris pv. campestris str. 8004 (15)
Xanthomonas campestris pv. campestris str. ATCC 33913 (xantCamp) Xanthomonas
campestris pv. vesicatoria str. 85-10 (13649) Xanthomonas oryzae pv. oryzae
KACC10331 (12931) Xanthomonas oryzae pv. oryzae MAFF 311018 (16297) Xanthomonas
oryzae pv. oryzae PXO99A (Xanthomonas_oryzae_PXO99A) Xylella fastidiosa 9a5c
(xyleFast) Xylella fastidiosa M12 (17823) Xylella fastidiosa Temecula1 (285)
Yangtze river dolphin 31 Jul 2013 (Lipotes_vexillifer_v1/lipVex1) (lipVex1)
Yellowbelly pufferfish May 2013 (version 1 of Takifugu flavidus genome/takFla1)
(takFla1) Yersinia enterocolitica subsp. enterocolitica 8081 (190) Yersinia
pestis Angola (16067) Yersinia pestis Antiqua (16645) Yersinia pestis CO92
(yersPest_CO92) Yersinia pestis KIM (288) Yersinia pestis Nepal516 (16646)
Yersinia pestis Pestoides F (16700) Yersinia pestis biovar Microtus str. 91001
(10638) Yersinia pseudotuberculosis IP 31758 (16070) Yersinia pseudotuberculosis
IP 32953 (12950) Yersinia pseudotuberculosis YPIII (28743) Zaire ebolavirus Aug.
2014 (NC_002549.1/zaiEbo1) (zaiEbo1) Zebra finch Feb. 2013 (WashU
taeGut324/taeGut2) (taeGut2) Zebra finch Jul. 2008 (WUGSC 3.2.4/taeGut1)
(taeGut1) Zebra mbuna Mar 2012 (MetZeb1.1/mayZeb1) (mayZeb1) Zebrafish Dec. 2008
(Zv8/danRer6) (danRer6) Zebrafish Jul. 2010 (Zv9/danRer7) (danRer7) Zebrafish
July 2007 (Zv7/danRer5) (danRer5) Zebrafish Mar. 2006 (Zv6/danRer4) (danRer4)
Zebrafish May 2005 (Zv5/danRer3) (danRer3) Zebrafish May 2017 (GRCz11/danRer11)
(danRer11) Zebrafish Sep. 2014 (GRCz10/danRer10) (danRer10) Zymomonas mobilis
subsp. mobilis ZM4 (zymoMobi_ZM4) chimp/human Jun. 2008 (UCSC Recon/homPan20)
(homPan20) hg19Haplotypes Feb. 2009 (GRCh37/hg19Haps) (hg19Haps) orang/human
Jun. 2008 (UCSC Recon/homIni20) (homIni20) pUC18 Plasmid (pUC18) phiX174 (phiX)
tarInv Dec. 2013 (GRCh38Tar/tarIhg38) (tarIhg38) uncultured methanogenic
archaeon RC-I (uncuMeth_RCI)
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