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Submitted URL: http://www.galaxyproject.org//community//regional
Effective URL: https://galaxyproject.org/community/sig/
Submission: On September 19 via api from US — Scanned from US

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Text Content

Global

 * Regions
   * Global
   * US
   * Europe
   * Australia
   * Freiburg
   * Erasmus MC
   * VIB
   * Pasteur
   * ELIXIR-IT/Laniakea
   * ELIXIR-FR/IFB
 * News
 * Events

 * Help
   * Get started
   * Training
   * FAQ
   * Galaxy Help Forum
 * Community
   * The Galaxy Community
   * Governance
   * Special Interest Groups
   * Working Groups
   * How to contribute
   * Galaxy Mentor Network
   * Blog
   * Code of Conduct
 * About
   * Platforms
   * Careers
   * Stats
   * Mailing lists
   * Publications
   * Citing Galaxy
   * Branding
   * Roadmap
 * Applications
   * COVID-19
   * Monkeypox
   * VGP
 * @jxtx

 * 
 * Edit


SPECIAL INTEREST GROUPS (SIG)





 * Directory of Special Interest Groups
   
   * Communities of Practice
     
     * Scientific Field
     * Methodologies
     * Service

 * Regional Communities
   
   * Scientific Projects

Galaxy Community Board

Galaxy SIGs

Galaxy WGs

Active Galaxy communities are encouraged to participate in (or form) their own
SIG, with a focus on specific shared interests. You can learn more in our
dedicated tutorial: What's a SIG?

In the following you will find a list of current active Special Interest Groups.
If you can't find yourself in this list we always welcome new SIGs. You can read
more about the GCB and SIGs or learn how to set up your own.


DIRECTORY OF SPECIAL INTEREST GROUPS

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COMMUNITIES OF PRACTICE


SCIENTIFIC FIELD

Climate

The Climate Science workbench is a comprehensive set of analysis tools and
consolidated workflow.

 *    GTN
 *    Galaxy Instance

Computational Chemistry

Group of computational chemistry tool developers, trainers and users to help
connect outreach, user needs, and computationalists.

 *    Matrix
 *    GTN
 *    Galaxy Instance

Earth

A web platform to get, process, analyze and visualize earth data.

 *    GTN
 *    Link
 *    Galaxy Instance for earth system
 *    Galaxy Instance for aquatic sciences

Ecology

A web platform to get, process, analyze and visualize ecological data.

 *    GTN
 *    Link
 *    Galaxy Instance

Genome Annotation

Galaxy as a platform for the annotation of genomes.

 *    GTN
 *    Galaxy Instance
 *    Matrix
 *    Link

Materials Science

A Galaxy workbench with tools and workflows for materials science, including
muon spectroscopy.

 *    Galaxy Instance
 *    Matrix

MicroGalaxy

Anything regarding microbial data analysis in Galaxy, with meetings, working
groups, chat and mailing list

 *    Mailing List
 *    Galaxy Instance
 *    Matrix

Public Health

Announcements and discussion in the Galaxy Public Health Community.

 *    Mailing List
 *    Matrix

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METHODOLOGIES

Machine Learning

A comprehensive set of data preprocessing, machine learning, deep learning and
visualisation tools, and consolidated workflows for end-to-end machine learning
analysis.

 *    GTN
 *    Galaxy Instance

Metabolomics

Community-driven metabolomics Galaxy service. The main aim is to give people a
public space to discover and run metabolomics tools.

 *    Mailing List
 *    GTN
 *    Galaxy Instance

Natural Language Processing

An open, interoperable web service platform for natural language processing
(NLP) research and development.

 *    Mailing List

Proteomics

Galaxy-based platform for the functional analysis and the interpretation of
proteomics and transcriptomics data in biomedical research.

 *    Mailing List
 *    Link
 *    Galaxy Instance

Single cell & sPatial Omics

The Single cell and sPatial Omics Community (🖖🏾SPOC) unites tool developers,
trainers and users to help connect outreach, user needs, and computationalists.

 * [m]   Matrix
 *    GTN
 *    Mailing List
 *    Galaxy Instance


SERVICE

Small Scale Admins

Admins of small scale Galaxy servers.

 *    Mailing List
 *    Matrix

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REGIONAL COMMUNITIES

Africa

Galaxy African community.

 *    Mailing List
 *    Galaxy Instance

Arabic

The Galaxy Arabic speaking community supports Galaxy activity for the Arabic
speaking community and Arabic speaking regions of the world.

 *    Twitter
 *    Mailing List
 *    Facebook

Australia

Australian Galaxy community.

 *    Link
 *    Twitter

Czech

Česká komunita Galaxy / Czech Galaxy Community.

 *    Mailing List
 *    Galaxy Instance

Europe

The European Galaxy Community and the European Galaxy Server.

 *    Link
 * [m]   Matrix
 *    Mailing List
 *    GitHub
 *    Mastodon
 *    RSS

France

Galaxy in the French-speaking world.

 *    Link
 *    Galaxy Instance

India

Indian Galaxy Community.

 *    Link
 *    Whatsapp
 *    Whatsapp
 *    Gitter
 *    Twitter
 *    Twitter
 *    GitHub
 *    Mailing List

Switzerland

Galaxy community in Switzerland

 *    Mailing List

UK

Galaxy in the United Kingdom.

 *    Twitter

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SCIENTIFIC PROJECTS

The global community is running a set of scientific multi-year-long projects
which includes these areas:

Cancer Informatics

This project emphasizes applying Galaxy in cancer research.

 * GitHub Project
 * Google Drive
 * Matrix Channel
 * Leadership: Luke Sargent

Human Genetics

This project emphasizes applying Galaxy in human research.

 * Google Drive
 * Goals Slide
 * Leadership: Enis Afgan

COVID-19

This project emphasizes analysis of SARS-CoV-2.

 * Project Page
 * Leadership: Anton Nekrutenko, Wolfgang Maier

VGP

Collaboration Between VGP and Galaxy Project for free and easy access to large
genome assembly workflows.

 * Slack Channel
 * Github Project
 * Leadership: Delphine Lariviere




usegalaxy.org is supported by NIH and NSF Grants HG006620, 1661497, and 1929694.
Computational resources are provided by the Advanced Cyberinfrastructure
Coordination Ecosystem (ACCESS-CI), Texas Advanced Computing Center, and the
JetStream2 scientific cloud - public computational resources supported by NSF.
usegalaxy.eu is supported by the German Federal Ministry of Education and
Research grant 031L0101C and de.NBI-epi. usegalaxy.org.au forms part of the
national Australian BioCommons infrastructure and is funded by Bioplatforms
Australia.