tfclass.bioinf.med.uni-goettingen.de
Open in
urlscan Pro
134.76.74.103
Public Scan
URL:
http://tfclass.bioinf.med.uni-goettingen.de/
Submission: On November 17 via api from US — Scanned from DE
Submission: On November 17 via api from US — Scanned from DE
Form analysis
1 forms found in the DOMName: classificationForm — POST /index.jsf;jsessionid=927a762de78a6b4d58e81c94c525
<form id="classificationForm" name="classificationForm" method="post" action="/index.jsf;jsessionid=927a762de78a6b4d58e81c94c525" enctype="application/x-www-form-urlencoded"><input type="hidden" name="classificationForm" value="classificationForm">
<span id="classificationForm:j_idt11" style="float:left">
<h3>Search in TFClass: <button id="classificationForm:searchHelpButton" name="classificationForm:searchHelpButton" type="button" onclick="return false;window.location.href='/index.jsf;jsessionid=927a762de78a6b4d58e81c94c525'" role="button"
aria-disabled="false" class="ui-button ui-widget ui-state-default ui-corner-all ui-button-text-only helpBtn"><span class="ui-button-text ui-c">?</span></button></h3><span id="classificationForm:j_idt15" class="ui-autocomplete"><input
id="classificationForm:j_idt15_input" name="classificationForm:j_idt15_input" type="text" autocomplete="off" value="" class="ui-autocomplete-input ui-inputfield ui-widget ui-state-default ui-corner-all" role="textbox" aria-disabled="false"
aria-readonly="false" aria-multiline="false"><input id="classificationForm:j_idt15_hinput" name="classificationForm:j_idt15_hinput" type="hidden" autocomplete="off"></span><button id="classificationForm:voidBtn"
name="classificationForm:voidBtn" onclick="PrimeFaces.ab({source:'classificationForm:voidBtn'});return false;" style="color: transparent; background-color: transparent; border-color: transparent; cursor: default;" type="submit" role="button"
aria-disabled="false"><span class="ui-button-text ui-c">ui-button</span></button>
<p><a href="http://factor.genexplain.com/cgi-bin/transfac_factor/search.cgi" target="_blank">Go to the search of TRANSFAC</a></p> <br><br>
<div id="classificationForm:j_idt18" style="border:1px solid lightgray; width:320px" class="ui-panel ui-widget ui-widget-content ui-corner-all">
<div id="classificationForm:j_idt18_content" class="ui-panel-content ui-widget-content"> Superclass: <img src="/resources/superclass.gif" height="15px">, Class: <img src="/resources/class.gif" height="15px">,<br> Family: <img
src="/resources/family.gif" height="15px">, Subfamily: <img src="/resources/subfamily.gif" height="15px">, Genus: <img src="/resources/genus.gif" height="15px">, </div>
</div>
<div id="classificationForm:cfTree" role="tree" aria-multiselectable="true" class="ui-tree ui-widget ui-widget-content ui-corner-all treePanel">
<ul class="ui-tree-container">
<li id="classificationForm:cfTree:0" data-rowkey="0" data-nodetype="Superclass" role="treeitem" class="ui-treenode ui-treenode-parent ui-treenode-unselected"><span aria-expanded="false" aria-selected="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-tree-toggler ui-icon ui-icon-triangle-1-e"></span><span></span><span class="ui-treenode-label ui-corner-all"><img src="/resources/superclass.gif" height="15px">1 Basic
domains</span></span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:cfTree:1" data-rowkey="1" data-nodetype="Superclass" role="treeitem" class="ui-treenode ui-treenode-parent ui-treenode-unselected"><span aria-expanded="false" aria-selected="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-tree-toggler ui-icon ui-icon-triangle-1-e"></span><span></span><span class="ui-treenode-label ui-corner-all"><img src="/resources/superclass.gif" height="15px">2
Zinc-coordinating DNA-binding domains</span></span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:cfTree:2" data-rowkey="2" data-nodetype="Superclass" role="treeitem" class="ui-treenode ui-treenode-parent ui-treenode-unselected"><span aria-expanded="false" aria-selected="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-tree-toggler ui-icon ui-icon-triangle-1-e"></span><span></span><span class="ui-treenode-label ui-corner-all"><img src="/resources/superclass.gif" height="15px">3
Helix-turn-helix domains</span></span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:cfTree:3" data-rowkey="3" data-nodetype="Superclass" role="treeitem" class="ui-treenode ui-treenode-parent ui-treenode-unselected"><span aria-expanded="false" aria-selected="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-tree-toggler ui-icon ui-icon-triangle-1-e"></span><span></span><span class="ui-treenode-label ui-corner-all"><img src="/resources/superclass.gif" height="15px">4 Other
all-alpha-helical DNA-binding domains</span></span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:cfTree:4" data-rowkey="4" data-nodetype="Superclass" role="treeitem" class="ui-treenode ui-treenode-parent ui-treenode-unselected"><span aria-expanded="false" aria-selected="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-tree-toggler ui-icon ui-icon-triangle-1-e"></span><span></span><span class="ui-treenode-label ui-corner-all"><img src="/resources/superclass.gif" height="15px">5 alpha-Helices
exposed by beta-structures</span></span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:cfTree:5" data-rowkey="5" data-nodetype="Superclass" role="treeitem" class="ui-treenode ui-treenode-parent ui-treenode-unselected"><span aria-expanded="false" aria-selected="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-tree-toggler ui-icon ui-icon-triangle-1-e"></span><span></span><span class="ui-treenode-label ui-corner-all"><img src="/resources/superclass.gif" height="15px">6
Immunoglobulin fold</span></span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:cfTree:6" data-rowkey="6" data-nodetype="Superclass" role="treeitem" class="ui-treenode ui-treenode-parent ui-treenode-unselected"><span aria-expanded="false" aria-selected="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-tree-toggler ui-icon ui-icon-triangle-1-e"></span><span></span><span class="ui-treenode-label ui-corner-all"><img src="/resources/superclass.gif" height="15px">7 beta-Hairpin
exposed by an alpha/beta-scaffold</span></span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:cfTree:7" data-rowkey="7" data-nodetype="Superclass" role="treeitem" class="ui-treenode ui-treenode-parent ui-treenode-unselected"><span aria-expanded="false" aria-selected="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-tree-toggler ui-icon ui-icon-triangle-1-e"></span><span></span><span class="ui-treenode-label ui-corner-all"><img src="/resources/superclass.gif" height="15px">8 beta-Sheet
binding to DNA</span></span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:cfTree:8" data-rowkey="8" data-nodetype="Superclass" role="treeitem" class="ui-treenode ui-treenode-parent ui-treenode-unselected"><span aria-expanded="false" aria-selected="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-tree-toggler ui-icon ui-icon-triangle-1-e"></span><span></span><span class="ui-treenode-label ui-corner-all"><img src="/resources/superclass.gif" height="15px">9 beta-Barrel
DNA-binding domains</span></span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:cfTree:9" data-rowkey="9" data-nodetype="Superclass" role="treeitem" class="ui-treenode ui-treenode-parent ui-treenode-unselected"><span aria-expanded="false" aria-selected="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-tree-toggler ui-icon ui-icon-triangle-1-e"></span><span></span><span class="ui-treenode-label ui-corner-all"><img src="/resources/superclass.gif" height="15px">0 Yet undefined
DNA-binding domains</span></span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
</ul><input type="hidden" id="classificationForm:cfTree_selection" name="classificationForm:cfTree_selection" value="">
</div>
</span>
<div id="classificationForm:detailsPanel" class="ui-panel ui-widget ui-widget-content ui-corner-all detailsPanel">
<div id="classificationForm:detailsPanel_content" class="ui-panel-content ui-widget-content">
<div id="classificationForm:generalReport" class="ui-panel ui-widget ui-widget-content ui-corner-all reportPanel">
<div id="classificationForm:generalReport_header" class="ui-panel-titlebar ui-widget-header ui-helper-clearfix ui-corner-all"><span class="ui-panel-title">General</span></div>
<div id="classificationForm:generalReport_content" class="ui-panel-content ui-widget-content"><span id="classificationForm:j_idt47">
<p><b>Transcription factors</b>, in a somewhat simplified definition, are proteins that regulate transcription by binding to specific sequence elements in regulatory genome regions such as promoters, enhancers etc. </p>
<p><b>TFClass</b> is a classification of eukaryotic transcription factors based on the characteristics of their DNA-binding domains. It comprises four general levels (superclass, class, family, subfamily) and two levels of instantiation
(genus and molecular species). Two of them (subfamily and factor species) are optional. More detailed explanations about the classification scheme and its criteria are given
<a href="http://www.edgar-wingender.de/TFClass_schema.html" target="_blank">here.</a>. </p>
<p> For further information about the latest version, kindly refer to Wingender, E., Schoeps, T., Haubrock, M., Krull, M. and Dönitz, J.: TFClass: expanding the classification of human transcription factors to their mammalian orthologs.
<a href="https://academic.oup.com/nar/article/46/D1/D343/4566021" target="_blank">
Nucleic Acids Res. 46, D343-D347 (2018).</a></p>
</span><br></div>
</div>
<div id="classificationForm:dashboard" class="ui-dashboard dashboard">
<div class="ui-dashboard-column ui-sortable"></div>
</div>
<div style="clear:both"></div>
</div>
</div>
<div id="classificationForm:j_idt1062" class="ui-dialog ui-widget ui-widget-content ui-overlay-hidden ui-corner-all ui-shadow ui-draggable ui-resizable" role="dialog" aria-labelledby="classificationForm:j_idt1062_title" aria-hidden="true"
style="width: auto; height: auto;">
<div class="ui-dialog-titlebar ui-widget-header ui-helper-clearfix ui-corner-top"><span id="classificationForm:j_idt1062_title" class="ui-dialog-title">Select
species</span><a href="#" class="ui-dialog-titlebar-icon ui-dialog-titlebar-close ui-corner-all" role="button"><span class="ui-icon ui-icon-closethick"></span></a></div>
<div class="ui-dialog-content ui-widget-content" style="height: auto;"><span id="classificationForm:speciesSelectionPanel">
<p>Selected the species for which a species report should be shown.</p>
<div id="classificationForm:j_idt1064" style="width:500px;height:600px" class="ui-scrollpanel ui-scrollpanel-native ui-widget ui-widget-content ui-corner-all">
<div id="classificationForm:j_idt1065" role="tree" aria-multiselectable="false" style="width: 100%" class="ui-tree ui-widget ui-widget-content ui-corner-all">
<ul class="ui-tree-container">
<li id="classificationForm:j_idt1065:0" data-rowkey="0" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Ailuropoda melanoleuca, giant panda</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:1" data-rowkey="1" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Bos taurus, cattle</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:2" data-rowkey="2" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Callithrix jacchus, white-tufted-ear marmoset</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:3" data-rowkey="3" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Canis lupus familiaris, dog</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:4" data-rowkey="4" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Cavia porcellus, domestic guinea pig</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:5" data-rowkey="5" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Choloepus hoffmanni, Hoffmann's two-fingered sloth</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:6" data-rowkey="6" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Dasypus novemcinctus, nine-banded armadillo</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:7" data-rowkey="7" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Dipodomys ordii, Ord's kangaroo rat</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:8" data-rowkey="8" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Echinops telfairi, small Madagascar hedgehog</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:9" data-rowkey="9" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Equus caballus, horse</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:10" data-rowkey="10" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Erinaceus europaeus, western European hedgehog</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:11" data-rowkey="11" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Felis catus, domestic cat</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:12" data-rowkey="12" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Gorilla gorilla gorilla, western lowland gorilla</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:13" data-rowkey="13" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Homo sapiens, human</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:14" data-rowkey="14" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Ictidomys tridecemlineatus, thirteen-lined ground squirrel</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:15" data-rowkey="15" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Loxodonta africana, African savanna elephant</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:16" data-rowkey="16" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Macaca mulatta, Rhesus monkey</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:17" data-rowkey="17" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Macropus eugenii, tammar wallaby</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:18" data-rowkey="18" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Microcebus murinus, gray mouse lemur</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:19" data-rowkey="19" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Monodelphis domestica, gray short-tailed opossum</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:20" data-rowkey="20" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Mus musculus, house mouse</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:21" data-rowkey="21" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Mustela putorius furo, domestic ferret</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:22" data-rowkey="22" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Myotis lucifugus, little brown bat</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:23" data-rowkey="23" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Nomascus leucogenys, northern white-cheeked gibbon</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:24" data-rowkey="24" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Ochotona princeps, American pika</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:25" data-rowkey="25" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Ornithorhynchus anatinus, platypus</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:26" data-rowkey="26" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Oryctolagus cuniculus, rabbit</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:27" data-rowkey="27" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Otolemur garnettii, small-eared galago</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:28" data-rowkey="28" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Ovis aries, sheep</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:29" data-rowkey="29" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Pan troglodytes, chimpanzee</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:30" data-rowkey="30" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Pongo abelii, Sumatran orangutan</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:31" data-rowkey="31" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Procavia capensis, Cape rock hyrax</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:32" data-rowkey="32" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Pteropus vampyrus, large flying fox</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:33" data-rowkey="33" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Rattus norvegicus, Norway rat</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:34" data-rowkey="34" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Sarcophilus harrisii, Tasmanian devil</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:35" data-rowkey="35" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Sorex araneus, European shrew</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:36" data-rowkey="36" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Sus scrofa, pig</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:37" data-rowkey="37" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Tarsius syrichta, Philippine tarsier</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:38" data-rowkey="38" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Tupaia belangeri, northern tree shrew</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:39" data-rowkey="39" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Tursiops truncatus, bottlenose dolphin</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
<li id="classificationForm:j_idt1065:40" data-rowkey="40" data-nodetype="default" role="treeitem" class="ui-treenode ui-treenode-leaf ui-treenode-unselected"><span aria-expanded="false" aria-selected="false" aria-checked="false"
class="ui-treenode-content ui-tree-selectable"><span class="ui-treenode-leaf-icon"></span>
<div class="ui-chkbox ui-widget">
<div class="ui-chkbox-box ui-widget ui-corner-all ui-state-default"><span class="ui-chkbox-icon ui-c"></span></div>
</div><span></span><span class="ui-treenode-label ui-corner-all">Vicugna pacos, alpaca</span>
</span>
<ul style="display:none" class="ui-treenode-children"></ul>
</li>
</ul><input type="hidden" id="classificationForm:j_idt1065_selection" name="classificationForm:j_idt1065_selection" value="">
</div>
</div>
</span></div>
<div class="ui-resizable-handle ui-resizable-n" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-s" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-e" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-w" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-ne" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-nw" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-se ui-icon ui-icon-gripsmall-diagonal-se" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-sw" style="z-index: 1000;"></div>
</div>
<div id="classificationForm:expressionTableDlg" style="max-height: 600px; width: auto; height: auto;" class="ui-dialog ui-widget ui-widget-content ui-overlay-hidden ui-corner-all ui-shadow ui-draggable ui-resizable" role="dialog"
aria-labelledby="classificationForm:expressionTableDlg_title" aria-hidden="true">
<div class="ui-dialog-titlebar ui-widget-header ui-helper-clearfix ui-corner-top"><span id="classificationForm:expressionTableDlg_title" class="ui-dialog-title">Expression
table</span><a href="#" class="ui-dialog-titlebar-icon ui-dialog-titlebar-close ui-corner-all" role="button"><span class="ui-icon ui-icon-closethick"></span></a></div>
<div class="ui-dialog-content ui-widget-content" style="height: auto;"><span id="classificationForm:expressionPanel"> The table below summarizes the protein expression data from the <a href="http://www.proteinatlas.org/">Protein Atlas</a>. The
tissues and cell types are linked to the <a href="http://cytomer.bioinf.med.uni-goettingen.de">Cytomer ontology</a><span id="classificationForm:j_idt1069">
<p>The selected tree node is not linked to a gene, no expression data is available.</p>
</span></span></div>
<div class="ui-resizable-handle ui-resizable-n" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-s" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-e" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-w" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-ne" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-nw" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-se ui-icon ui-icon-gripsmall-diagonal-se" style="z-index: 1000;"></div>
<div class="ui-resizable-handle ui-resizable-sw" style="z-index: 1000;"></div>
</div> <input type="hidden" name="javax.faces.ViewState" id="j_id1:javax.faces.ViewState:0" value="977436351197494881:-1980671416412092973" autocomplete="off">
</form>
Text Content
Status Please wait ... CLASSIFICATION OF TRANSCRIPTION FACTORS IN MAMMALIA ABOUT TFCLASS SEARCH IN TFCLASS: ? ui-button Go to the search of TRANSFAC Superclass: , Class: , Family: , Subfamily: , Genus: , * 1 Basic domains * 2 Zinc-coordinating DNA-binding domains * 3 Helix-turn-helix domains * 4 Other all-alpha-helical DNA-binding domains * 5 alpha-Helices exposed by beta-structures * 6 Immunoglobulin fold * 7 beta-Hairpin exposed by an alpha/beta-scaffold * 8 beta-Sheet binding to DNA * 9 beta-Barrel DNA-binding domains * 0 Yet undefined DNA-binding domains General Transcription factors, in a somewhat simplified definition, are proteins that regulate transcription by binding to specific sequence elements in regulatory genome regions such as promoters, enhancers etc. TFClass is a classification of eukaryotic transcription factors based on the characteristics of their DNA-binding domains. It comprises four general levels (superclass, class, family, subfamily) and two levels of instantiation (genus and molecular species). Two of them (subfamily and factor species) are optional. More detailed explanations about the classification scheme and its criteria are given here.. For further information about the latest version, kindly refer to Wingender, E., Schoeps, T., Haubrock, M., Krull, M. and Dönitz, J.: TFClass: expanding the classification of human transcription factors to their mammalian orthologs. Nucleic Acids Res. 46, D343-D347 (2018). Select species Selected the species for which a species report should be shown. * Ailuropoda melanoleuca, giant panda * Bos taurus, cattle * Callithrix jacchus, white-tufted-ear marmoset * Canis lupus familiaris, dog * Cavia porcellus, domestic guinea pig * Choloepus hoffmanni, Hoffmann's two-fingered sloth * Dasypus novemcinctus, nine-banded armadillo * Dipodomys ordii, Ord's kangaroo rat * Echinops telfairi, small Madagascar hedgehog * Equus caballus, horse * Erinaceus europaeus, western European hedgehog * Felis catus, domestic cat * Gorilla gorilla gorilla, western lowland gorilla * Homo sapiens, human * Ictidomys tridecemlineatus, thirteen-lined ground squirrel * Loxodonta africana, African savanna elephant * Macaca mulatta, Rhesus monkey * Macropus eugenii, tammar wallaby * Microcebus murinus, gray mouse lemur * Monodelphis domestica, gray short-tailed opossum * Mus musculus, house mouse * Mustela putorius furo, domestic ferret * Myotis lucifugus, little brown bat * Nomascus leucogenys, northern white-cheeked gibbon * Ochotona princeps, American pika * Ornithorhynchus anatinus, platypus * Oryctolagus cuniculus, rabbit * Otolemur garnettii, small-eared galago * Ovis aries, sheep * Pan troglodytes, chimpanzee * Pongo abelii, Sumatran orangutan * Procavia capensis, Cape rock hyrax * Pteropus vampyrus, large flying fox * Rattus norvegicus, Norway rat * Sarcophilus harrisii, Tasmanian devil * Sorex araneus, European shrew * Sus scrofa, pig * Tarsius syrichta, Philippine tarsier * Tupaia belangeri, northern tree shrew * Tursiops truncatus, bottlenose dolphin * Vicugna pacos, alpaca Expression table The table below summarizes the protein expression data from the Protein Atlas. The tissues and cell types are linked to the Cytomer ontology The selected tree node is not linked to a gene, no expression data is available. Searches in the label, ID and external references.